Anchorpoints

Gene id
AT1G51400
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT3G21055photosystem II subunit T (PSBTN); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid lumen, chloroplast photosystem II, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Photosystem II 5 kD protein (TAIR:AT1G51400.1); Has 88 Blast hits to 88 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). Encodes photosystem II 5 kD protein subunit PSII-T. This is a nuclear-encoded gene (PsbTn) which also has a plastid-encoded paralog (PsbTc). photosystem II subunit T3-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G23070No description available.scaffold_3-View
AL1G46140No description available.scaffold_1-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR01G29640No description available.A01+View
BR05G22620No description available.A05+View
BR03G36540No description available.A03-View
BR06G02420No description available.A06+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV2G09490No description available.Bvchr2.sca001+View
BV4G13010No description available.Bvchr4.sca001-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL02G23150No description available.Chr2+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00022G04150No description available.CM3.5_scaffold00022+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00084G00440No description available.supercontig_84+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G38370No description available.scaffold_1-View
CRU_003G19970No description available.scaffold_3-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00054G00400No description available.scaffold00054+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0002G30890No description available.scaffold_2-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV2G49000Photosystem II 5 kDa protein, chloroplastic (PSII-T), Precursor (probable)LG2+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM15G43100No description available.Gm15+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR04G17180No description available.Chr04+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD11G015630No description available.11-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME10963G00270No description available.scaffold10963+View
ME04681G00510No description available.scaffold04681-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_004G25720No description available.scaffold_4-View
PPE_002G06950No description available.scaffold_2+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G26500No description available.Chr01+View
PT09G05250No description available.Chr09+View
PT01G25690No description available.Chr01+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30169G02100No description available.30169+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G40430No description available.scaffold_1+View
TC0009G23200No description available.scaffold_9-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G38070similar to AT1G51400|photosystem II 5 kD proteinch1-2-View
TP3G19010similar to AT3G21055|PSBTN (photosystem II subunit T)ch3-1-View


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Gene id
Species
Description
Chromosome
Strand