Anchorpoints

Gene id
AT1G50490
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT3G20060Encodes one of two ubiquitin-conjugating enzymes belonging to the E2-C gene family (the other being UBC19). Transcript is always found in dividing cells, but also in other non-dividing cells. Protein is localized to the cytoplasm as well as to the nucleus. ubiquitin-conjugating enzyme19 (UBC19); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme E2 H10 (InterPro:IPR015582), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 20 (TAIR:AT1G50490.1); Has 2436 Blast hits to 2429 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 552; Fungi - 119; Plants - 1682; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). ubiquitin-conjugating enzyme193-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G21890No description available.scaffold_3-View
AL1G44970No description available.scaffold_1-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR01G30110No description available.A01+View
BR08G02910No description available.A08+View
BR05G18300No description available.A05+View
BR06G02970No description available.A06+View
BR05G23570No description available.A05+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G37600No description available.scaffold_1-View
CRU_003G19050No description available.scaffold_3-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G37330similar to AT1G50490|UBC20 (ubiquitin-conjugating enzyme 20)ch1-2-View
TP3G18090similar to AT3G20060|UBC19 (ubiquitin-conjugating enzyme19)ch3-1-View


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Gene id
Species
Description
Chromosome
Strand