Anchorpoints

Gene id
AT1G50410
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT3G20010SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related (TAIR:AT1G50410.1); Has 24758 Blast hits to 15202 proteins in 1867 species: Archae - 89; Bacteria - 7985; Metazoa - 5530; Fungi - 5269; Plants - 2318; Viruses - 151; Other Eukaryotes - 3416 (source: NCBI BLink). SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related3+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G44880No description available.scaffold_1+View
AL3G21810No description available.scaffold_3+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G36160No description available.A03+View
BR06G03020No description available.A06-View
BR01G30130No description available.A01-View
BR05G23620No description available.A05-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G18990No description available.scaffold_3+View
CRU_001G37530No description available.scaffold_1+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM10G43430No description available.Gm10-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR12G13600No description available.Chr12-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME05875G02590No description available.scaffold05875+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT1G115215chromatin remodeling proteinchr1-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30131G04150No description available.30131-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G37240similar to AT1G50410|SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing proteinch1-2+View
TP3G18040similar to AT3G20010|SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing proteinch3-1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV10G07540name=GSVIVG01034370001;chr10-View


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Gene id
Species
Description
Chromosome
Strand