Expansion plot
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Functional clusters
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BLAST
WorkbenchAnchorpoints
- Gene id
- AT1G35460
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT4G09180 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G35460.1); Has 2162 Blast hits to 2156 proteins in 92 species: Archae - 0; Bacteria - 0; Metazoa - 145; Fungi - 2; Plants - 2012; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | 4 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL1G37250 | No description available. | scaffold_1 | + | View |
| AL6G31430 | No description available. | scaffold_6 | + | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR08G08030 | No description available. | A08 | + | View |
| BR05G19750 | No description available. | A05 | - | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_006G26840 | No description available. | scaffold_6 | + | View |
| CRU_001G31470 | No description available. | scaffold_1 | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT19G07990 | No description available. | Chr19 | + | View |
| PT13G10750 | No description available. | Chr13 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL06G065040 | BHLH transcription factor (AHRD V1 *-** B6TXR4_MAIZE)%3B contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding | ch06 | + | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP1G30180 | similar to AT1G35460|basic helix-loop-helix (bHLH) family protein | ch1-1 | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV18G14510 | name=GSVIVG01026056001; | chr18 | + | View |