Anchorpoints

Gene id
AT1G32230
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT2G35510similar to RCD one 1 (SRO1); FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WWE domain (InterPro:IPR004170), Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317), RST domain of plant C-terminal (InterPro:IPR022003); BEST Arabidopsis thaliana protein match is: WWE protein-protein interaction domain protein family (TAIR:AT1G32230.3); Has 207 Blast hits to 202 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 34; Fungi - 0; Plants - 160; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). Encodes a WWE domain-containing protein with 76% similarity to RCD1. The protein also contains a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. similar to RCD one 12-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL4G20880No description available.scaffold_4-View
AL1G33490No description available.scaffold_1+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00048G00660No description available.scaffold00048+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR04G21010No description available.A04-View
BR08G08690No description available.A08-View
BR05G09220No description available.A05+View
BR09G26670No description available.A09-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL09G11120No description available.Chr9+View
CL10G00820No description available.Chr10-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00021G01310No description available.CM3.5_scaffold00021+View
CM01596G01500No description available.CM3.5_scaffold01596-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00208G00080No description available.supercontig_208+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_004G16610No description available.scaffold_4-View
CRU_001G29130No description available.scaffold_1+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00212G00080No description available.scaffold00212+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0005G02080No description available.scaffold_5+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV0G29710Poly [ADP-ribose] polymerase 15 (PARP-15) (probable)scf0513178+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM09G34000No description available.Gm09+View
GM01G01900No description available.Gm01-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G22420No description available.Chr08+View
GR04G18240No description available.Chr04+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT7G011550inactive poly [ADP-ribose] polymerase RCD1chr7-View
MT5G029580inactive poly [ADP-ribose] polymerase SRO4chr5-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G13720No description available.Chr01-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30068G01410No description available.30068+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL08G005270Poly polymerase catalytic domain containing protein expressed (AHRD V1 **-- Q84T80_ORYSJ)%3B contains Interpro domain(s) IPR012317 Poly(ADP-ribose) polymerase%2C catalytic regionch08-View
SL08G076420Poly polymerase catalytic domain containing protein expressed (AHRD V1 **-- Q84T80_ORYSJ)%3B contains Interpro domain(s) IPR012317 Poly(ADP-ribose) polymerase%2C catalytic regionch08-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST06G022710Poly polymerase catalytic domain containing protein expressed (AHRD V1 **-- Q84T80_ORYSJ); contains Interpro domain(s) IPR012317 Poly(ADP-ribose) polymerase, catalytic regionchr06+View
ST08G021880Poly polymerase catalytic domain containing protein expressed (AHRD V1 **-- Q84T80_ORYSJ); contains Interpro domain(s) IPR012317 Poly(ADP-ribose) polymerase, catalytic regionchr08+View
ST08G008700Poly polymerase catalytic domain containing protein expressed (AHRD V1 **-- Q84T80_ORYSJ); contains Interpro domain(s) IPR012317 Poly(ADP-ribose) polymerase, catalytic regionchr08+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0003G30460No description available.scaffold_3-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G27910similar to AT1G32230|RCD1 (RADICAL-INDUCED CELL DEATH1)ch1-1+View
TP4G17730similar to AT2G35510|SRO1 (SIMILAR TO RCD ONE 1)ch4-6-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV02G01830name=GSVIVG01013090001;chr2+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM01G22650No description available.1-View
ZM05G12830No description available.5-View


Download

Gene id
Species
Description
Chromosome
Strand