Anchorpoints

Gene id
AT1G30100
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT4G18350nine-cis-epoxycarotenoid dioxygenase 2 (NCED2); CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 5 (TAIR:AT1G30100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). nine-cis-epoxycarotenoid dioxygenase 2 Encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. The expression of this gene declines during the first 12h of imbibition.4+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G31100No description available.scaffold_1+View
AL7G24440No description available.scaffold_7-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00092G01540No description available.scaffold00092-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G44500No description available.A03+View
BR01G09430No description available.A01+View
BR09G28550No description available.A09-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV0G44490No description available.0109.scaffold00365+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G24710No description available.Chr1+View
CL03G06540No description available.Chr3-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00001G08720No description available.CM3.5_scaffold00001+View
CM00007G01450No description available.CM3.5_scaffold00007-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00246G00030No description available.supercontig_246-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_007G21890No description available.scaffold_7-View
CRU_001G27120No description available.scaffold_1+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00007G02620No description available.scaffold00007+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0004G02160No description available.scaffold_4+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV3G053809-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic, Precursor (similar to)LG3+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM08G10190No description available.Gm08+View
GM05G27250No description available.Gm05+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR11G04520No description available.Chr11+View
GR10G16690No description available.Chr10+View
GR09G15460No description available.Chr09-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD05G007000No description available.5+View
MD05G007590No description available.5+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03859G00170No description available.scaffold03859-View
ME04251G00570No description available.scaffold04251-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS07G059409-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed7+View
OS12G422809-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed12+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_004G07790No description available.scaffold_4+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT11G08410No description available.Chr11-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29693G00290No description available.29693-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL08G0167209-cis-epoxycarotenoid dioxygenase 5 (AHRD V1 **** A0SE34_9ROSI)%3B contains Interpro domain(s) IPR004294 Carotenoid oxygenasech08+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0006G14670No description available.scaffold_6-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G25960similar to AT1G30100|NCED5 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 5)ch1-1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV10G04440name=GSVIVG01021507001;chr10+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM02G46820No description available.2+View
ZM01G464509-cis-epoxycarotenoid dioxygenase 1, chloroplastic 9-cis-epoxycarotenoid dioxygenase 1, chloroplastic Precursor (EC 1.13.11.51)(Protein VIVIPAROUS14)(VP-14)1-View
ZM01G29580No description available.1+View
ZM07G01910viviparous-147+View


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Gene id
Species
Description
Chromosome
Strand