Anchorpoints

Gene id
AT1G26830
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G69670cullin 3B (CUL3B); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 3 (TAIR:AT1G26830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). cullin 3B cullin, putative, contains similarity to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from (Homo sapiens); contains Pfam profile PF00888: Cullin family. Interacts with members of AtBPM family and RBX1 suggesting it is part of an E3 ligase complex involved in RUB modification.1-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G26600No description available.scaffold_1+View
AL2G17930No description available.scaffold_2-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR09G30170No description available.A09+View
BR08G23410No description available.A08+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G23140No description available.scaffold_1+View
CRU_002G15370No description available.scaffold_2-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00003G04170No description available.scaffold00003+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM08G41130No description available.Gm08+View
GM18G15240No description available.Gm18-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR06G02050No description available.Chr06-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD13G004850No description available.13-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03834G00160No description available.scaffold03834-View
ME11495G00360No description available.scaffold11495-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G28420No description available.scaffold_1+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G087900Cullin C (AHRD V1 ***- D3BHJ6_POLPA)%3B contains Interpro domain(s) IPR001373 Cullin%2C N-terminalch02+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G034960Ubiquitin-protein ligase Cullin 4 (AHRD V1 **** D8RM97_SELML); contains Interpro domain(s) IPR001373 Cullin, N-terminalchr02-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G21950similar to AT1G26830|ATCUL3 (ARABIDOPSIS THALIANA CULLIN 3)ch1-1-View


Download

Gene id
Species
Description
Chromosome
Strand