Anchorpoints
- Gene id
- AT1G26830
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G69670 | cullin 3B (CUL3B); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 3 (TAIR:AT1G26830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). cullin 3B cullin, putative, contains similarity to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from (Homo sapiens); contains Pfam profile PF00888: Cullin family. Interacts with members of AtBPM family and RBX1 suggesting it is part of an E3 ligase complex involved in RUB modification. | 1 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL1G26600 | No description available. | scaffold_1 | + | View |
AL2G17930 | No description available. | scaffold_2 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR09G30170 | No description available. | A09 | + | View |
BR08G23410 | No description available. | A08 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_001G23140 | No description available. | scaffold_1 | + | View |
CRU_002G15370 | No description available. | scaffold_2 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00003G04170 | No description available. | scaffold00003 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM08G41130 | No description available. | Gm08 | + | View |
GM18G15240 | No description available. | Gm18 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR06G02050 | No description available. | Chr06 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD13G004850 | No description available. | 13 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME03834G00160 | No description available. | scaffold03834 | - | View |
ME11495G00360 | No description available. | scaffold11495 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_001G28420 | No description available. | scaffold_1 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL02G087900 | Cullin C (AHRD V1 ***- D3BHJ6_POLPA)%3B contains Interpro domain(s) IPR001373 Cullin%2C N-terminal | ch02 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST02G034960 | Ubiquitin-protein ligase Cullin 4 (AHRD V1 **** D8RM97_SELML); contains Interpro domain(s) IPR001373 Cullin, N-terminal | chr02 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP1G21950 | similar to AT1G26830|ATCUL3 (ARABIDOPSIS THALIANA CULLIN 3) | ch1-1 | - | View |