Anchorpoints
- Gene id
- AT1G26500
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT3G25210 | Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G27800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | 3 | + | View |
AT3G29290 | embryo defective 2076 (emb2076); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G02860.1); Has 34767 Blast hits to 12132 proteins in 265 species: Archae - 2; Bacteria - 30; Metazoa - 249; Fungi - 365; Plants - 32849; Viruses - 0; Other Eukaryotes - 1272 (source: NCBI BLink). Pentatricopeptide repeat (PPR) superfamily protein | 3 | + | View |
AT2G15630 | Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G01110.1); Has 56384 Blast hits to 14280 proteins in 305 species: Archae - 4; Bacteria - 41; Metazoa - 1079; Fungi - 1056; Plants - 52130; Viruses - 0; Other Eukaryotes - 2074 (source: NCBI BLink). Pentatricopeptide repeat (PPR) superfamily protein | 2 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL1G27140 | No description available. | scaffold_1 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR09G29850 | No description available. | A09 | + | View |
BR09G48750 | No description available. | A09 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL06G08000 | No description available. | Chr6 | + | View |
CL08G10080 | No description available. | Chr8 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_001G23560 | No description available. | scaffold_1 | - | View |
CRU_005G07420 | No description available. | scaffold_5 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0002G25940 | No description available. | scaffold_2 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV0G04320 | Putative pentatricopeptide repeat-containing protein At1g26500 | scf0513158 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM02G12910 | No description available. | Gm02 | - | View |
GM01G07040 | No description available. | Gm01 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT5G044120 | PPR containing plant-like protein | chr5 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_001G29700 | No description available. | scaffold_1 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST04G005030 | Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7KQP9_ARALY); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat | chr04 | + | View |
ST02G034280 | Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7MRA3_ARALY); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat | chr02 | - | View |
ST05G005770 | Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7KX87_ARALY); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat | chr05 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0004G09540 | No description available. | scaffold_4 | + | View |
TC0002G33190 | No description available. | scaffold_2 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP2G17890 | similar to AT3G29290|emb2076 (embryo defective 2076) | ch2-4 | + | View |
TP1G22250 | similar to AT1G26500|pentatricopeptide (PPR) repeat-containing protein | ch1-1 | - | View |
TP1G12140 | similar to AT1G13800|pentatricopeptide (PPR) repeat-containing protein | ch1-1 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV01G10420 | name=GSVIVG01012216001; | chr1 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM07G26390 | No description available. | 7 | - | View |