Anchorpoints

Gene id
AT1G25450
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G68530Encodes KCS6, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). 3-ketoacyl-CoA synthase 6 3-ketoacyl-CoA synthase 6 (KCS6); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: in 7 processes; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 5 (TAIR:AT1G25450.1); Has 4523 Blast hits to 4503 proteins in 1079 species: Archae - 0; Bacteria - 1483; Metazoa - 0; Fungi - 25; Plants - 2866; Viruses - 0; Other Eukaryotes - 149 (source: NCBI BLink).1-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G27720No description available.scaffold_1+View
AL2G16720No description available.scaffold_2-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR07G22740No description available.A07+View
BR09G29480No description available.A09-View
BR02G19210No description available.A02-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL05G23800No description available.Chr5-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00016G05820No description available.CM3.5_scaffold00016+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G24040No description available.scaffold_1+View
CRU_002G14150No description available.scaffold_2-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00019G00310No description available.scaffold00019-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0007G17700No description available.scaffold_7-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV0G017003-ketoacyl-CoA synthase 6 (KCS-6) (putative)scf0513158-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM20G24930No description available.Gm20+View
GM10G42100No description available.Gm10-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD16G001700No description available.16-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME08359G00120No description available.scaffold08359-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT1G1109303-ketoacyl-CoA synthase-like proteinchr1-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G32010No description available.scaffold_1+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G12530No description available.Chr10-View
PT08G12030No description available.Chr08+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC27524G00120No description available.27524-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0002G23080No description available.scaffold_2-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G22760similar to AT1G25450|KCS5 (3-KETOACYL-COA SYNTHASE 5)ch1-1+View
TP5G23600similar to AT1G68530|KCS6 (3-KETOACYL-COA SYNTHASE 6)ch5-6-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV01G07790name=GSVIVG01011900001;chr1+View


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Gene id
Species
Description
Chromosome
Strand