Anchorpoints

Gene id
AT1G22760
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G71770Encodes a Class I polyA-binding protein. Expressed in floral organs. Binds polyA sepharose in vitro. poly(A)-binding protein 5 (PAB5); FUNCTIONS IN: RNA binding, poly(A) RNA binding, translation initiation factor activity; INVOLVED IN: translational initiation, nuclear-transcribed mRNA poly(A) tail shortening; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004), RNA recognition motif, RNP-1 (InterPro:IPR000504), Polyadenylate binding protein, human types 1, 2, 3, 4 (InterPro:IPR006515), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA recognition, domain 1 (InterPro:IPR003954); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 3 (TAIR:AT1G22760.1); Has 55698 Blast hits to 24293 proteins in 890 species: Archae - 24; Bacteria - 3417; Metazoa - 28886; Fungi - 7111; Plants - 10105; Viruses - 0; Other Eukaryotes - 6155 (source: NCBI BLink). poly(A)-binding protein 51-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G24370No description available.scaffold_1+View
AL2G20470No description available.scaffold_2-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR07G28000No description available.A07-View
BR02G21060No description available.A02-View
BR07G21560No description available.A07+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL08G07050No description available.Chr8+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_002G17460No description available.scaffold_2-View
CRU_001G21360No description available.scaffold_1+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00002G01480No description available.scaffold00002-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV2G20780Polyadenylate-binding protein 3 (Poly(A)-binding protein 3) (putative)LG2+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM16G27670No description available.Gm16+View
GM20G31120No description available.Gm20-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G06270No description available.Chr02+View
PT05G19850No description available.Chr05-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST04G026200Polyadenylate-binding protein 2 (AHRD V1 **** B6U4M0_MAIZE); contains Interpro domain(s) IPR006515 Polyadenylate binding protein, human types 1, 2, 3, 4chr04-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G20270similar to AT1G22760|PAB3 (POLY(A) BINDING PROTEIN 3)ch1-1+View
TP5G26790similar to AT1G71770|PAB5 (POLY(A)-BINDING PROTEIN 5)ch5-6-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV00G22410name=GSVIVG01013699001;chr18_random+View


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Gene id
Species
Description
Chromosome
Strand