Anchorpoints

Gene id
AT1G20620
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT4G35090catalase 2 (CAT2); FUNCTIONS IN: protein binding, catalase activity, cobalt ion binding; INVOLVED IN: in 10 processes; LOCATED IN: mitochondrion, cytosolic ribosome, stromule, peroxisome, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Catalase (InterPro:IPR002226), Catalase related subgroup (InterPro:IPR018028), Catalase-like domain, haem-dependent (InterPro:IPR020835), Catalase, N-terminal (InterPro:IPR011614), Catalase-related immune responsive (InterPro:IPR010582); BEST Arabidopsis thaliana protein match is: catalase 1 (TAIR:AT1G20630.1); Has 6114 Blast hits to 6094 proteins in 1849 species: Archae - 22; Bacteria - 4292; Metazoa - 675; Fungi - 546; Plants - 461; Viruses - 0; Other Eukaryotes - 118 (source: NCBI BLink). catalase 2 Encodes a peroxisomal catalase, highly expressed in bolts and leaves. mRNA expression patterns show circadian regulation with mRNA levels being high in the subjective early morning. Loss of function mutations have increased H2O2 levels and increased H2O2 sensitivity. Mutants accumulate more toxic ions yet show decreased sensitivity to Li+. This decreased sensitivity is most likely due to an insensitivity to ethylene. Note that in Queval et al. (2007) Plant Journal, 52(4):640, SALK_057998 is named as cat2-1, SALK_076998 is named as cat2-2; in Bueso et al. (2007) Plant Journal, 52(6):1052, SALK_076998 is named as cat2-1. TAIR has adopted the nomenclature consistent with that in Bueso et al. (2007) after consultation with the authors: SALK_076998 (cat2-1), SALK_057998 (cat2-2).4-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL7G05870No description available.scaffold_7+View
AL1G21770No description available.scaffold_1+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR07G10320No description available.A07-View
BR08G25070No description available.A08-View
BR06G14880No description available.A06+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV0G05020No description available.Bvchr6_un.sca002-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL08G09200No description available.Chr8-View
CL11G12640No description available.Chr11+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00029G04060No description available.CM3.5_scaffold00029+View
CM00096G00380No description available.CM3.5_scaffold00096-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00026G01880No description available.supercontig_26-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G19270No description available.scaffold_1+View
CRU_007G04900No description available.scaffold_7+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00002G06650No description available.scaffold00002+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G30320No description available.scaffold_6+View
EG0006G14470No description available.scaffold_6+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV5G40900CatalaseLG5-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM06G02040No description available.Gm06-View
GM14G39810Catalase-3Gm14-View
GM04G01920Catalase-4Gm04-View
GM17G38140Catalase-1/2Gm17+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR02G11590No description available.Chr02-View
GR03G00280No description available.Chr03-View
GR01G19870No description available.Chr01+View
GR09G18760No description available.Chr09-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ1G030830No description available.chr1+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD06G000920No description available.6-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME02943G01030No description available.scaffold02943+View
ME06512G01900No description available.scaffold06512+View
ME07520G03340No description available.scaffold07520+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT3G115370catalase heme-binding enzymechr3+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G03910catalase domain containing protein, expressed3-View
OS06G51150catalase isozyme B, putative, expressed Catalase isozyme B6+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_005G01190No description available.scaffold_5-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT05G10040No description available.Chr05+View
PT07G06210No description available.Chr07+View
PT02G00980No description available.Chr02-View
PT05G25160No description available.Chr05+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29830G00550No description available.29830+View
RC30170G06850Catalase isozyme 1 Catalase isozyme 230170+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL12G094620Catalase (AHRD V1 ***- Q2PYW5_SOLTU)%3B contains Interpro domain(s) IPR018028 Catalase related subgroup Catalase isozyme 1ch12+View
SL02G082760Catalase (AHRD V1 **** O24511_TOBAC)%3B contains Interpro domain(s) IPR018028 Catalase related subgroup Catalase isozyme 2ch02-View
SL04G082460Catalase (AHRD V1 **** Q8L7J7_CAPAN)%3B contains Interpro domain(s) IPR018028 Catalase related subgroupch04+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST04G035910Catalase (AHRD V1 ***- Q8L7J7_CAPAN); contains Interpro domain(s) IPR018028 Catalase related subgroupchr04+View
ST12G027890Catalase (AHRD V1 ***- Q2PYW5_SOLTU); contains Interpro domain(s) IPR018028 Catalase related subgroupchr12+View
ST02G026140Catalase (AHRD V1 ***- O24511_TOBAC); contains Interpro domain(s) IPR018028 Catalase related subgroupchr02-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G00600No description available.scaffold_1-View
TC0008G05800No description available.scaffold_8+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G18320similar to AT1G20620|CAT3 (CATALASE 3)ch1-1+View
TP7G32860similar to AT4G35090|CAT2 (CATALASE 2)ch7-6-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G12280name=GSVIVG01013369001;chr18-View
VV04G06230name=GSVIVG01026655001;chr4+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM05G16210Catalase isozyme 1 (EC 1.11.1.6) Catalase isozyme 15+View
ZM01G02380catalase2;Catalase isozyme 2 (EC 1.11.1.6) Catalase isozyme 21-View


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Gene id
Species
Description
Chromosome
Strand