Anchorpoints
- Gene id
- AT1G19650
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT4G34580 | Encodes COW1 (can of worms1), a phosphatidylinositol transfer protein essential for root hair tip growth. The N-terminus of the COW1 protein is 32% identical to an essential phosphatidylinositol transfer protein (PITP), the yeast Sec14 protein (sec14p) while the C-terminus is 34.5% identical to a late nodulin of Lotus japonicus, Nlj16. Expression of COW1 complements the growth defect associated with Sec14p dysfunction in yeast. GFP fused to the COW1 protein specifically accumulates at the site of root hair outgrowth. Sec14p-like phosphatidylinositol transfer family protein CAN OF WORMS1 (COW1); FUNCTIONS IN: transporter activity, phosphatidylinositol transporter activity; INVOLVED IN: root epidermal cell differentiation, transport, root hair cell tip growth, cell tip growth; LOCATED IN: intracellular; EXPRESSED IN: 9 plant structures; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT2G16380.1); Has 3006 Blast hits to 2988 proteins in 244 species: Archae - 0; Bacteria - 0; Metazoa - 982; Fungi - 671; Plants - 907; Viruses - 0; Other Eukaryotes - 446 (source: NCBI BLink). | 4 | + | View |
AT4G39170 | Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: phosphatidylinositol transporter activity, transporter activity; INVOLVED IN: transport; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT2G21520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). Sec14p-like phosphatidylinositol transfer family protein | 4 | + | View |
AT2G18180 | Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: SEC14-like 12 (TAIR:AT4G36490.1); Has 2664 Blast hits to 2639 proteins in 234 species: Archae - 0; Bacteria - 0; Metazoa - 761; Fungi - 594; Plants - 895; Viruses - 1; Other Eukaryotes - 413 (source: NCBI BLink). Sec14p-like phosphatidylinositol transfer family protein | 2 | - | View |
AT2G16380 | Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: intracellular; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G34580.1); Has 2691 Blast hits to 2676 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 819; Fungi - 614; Plants - 876; Viruses - 0; Other Eukaryotes - 382 (source: NCBI BLink). Sec14p-like phosphatidylinositol transfer family protein | 2 | + | View |
AT5G56160 | Sec14p-like phosphatidylinositol transfer family protein Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G55690.2); Has 2063 Blast hits to 2057 proteins in 224 species: Archae - 3; Bacteria - 0; Metazoa - 550; Fungi - 432; Plants - 748; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). | 5 | + | View |
AT1G75370 | Sec14p-like phosphatidylinositol transfer family protein Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G19650.1); Has 2578 Blast hits to 2567 proteins in 225 species: Archae - 0; Bacteria - 2; Metazoa - 778; Fungi - 522; Plants - 891; Viruses - 0; Other Eukaryotes - 385 (source: NCBI BLink). | 1 | - | View |
AT4G36490 | SEC14-like 12 SEC14-like 12 (SFH12); CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT2G18180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | 4 | + | View |
AT2G21520 | Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). Sec14p-like phosphatidylinositol transfer family protein | 2 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL1G20660 | No description available. | scaffold_1 | - | View |
AL7G01090 | No description available. | scaffold_7 | + | View |
AL8G21610 | No description available. | scaffold_8 | + | View |
AL7G04360 | No description available. | scaffold_7 | + | View |
AL3G40380 | No description available. | scaffold_3 | + | View |
AL3G39170 | No description available. | scaffold_3 | - | View |
AL4G00750 | No description available. | scaffold_4 | - | View |
AL2G24250 | No description available. | scaffold_2 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR08G20020 | No description available. | A08 | + | View |
BR03G54280 | No description available. | A03 | + | View |
BR03G12290 | No description available. | A03 | - | View |
BR07G19980 | No description available. | A07 | + | View |
BR06G39430 | No description available. | A06 | + | View |
BR06G14110 | No description available. | A06 | - | View |
BR01G03580 | No description available. | A01 | - | View |
BR09G44480 | No description available. | A09 | + | View |
BR08G13870 | No description available. | A08 | - | View |
BR04G11970 | No description available. | A04 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV1G08940 | No description available. | Bvchr1.sca001 | + | View |
BV9G13150 | No description available. | Bvchr9.sca026 | + | View |
BV6G16080 | No description available. | Bvchr6.sca002 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL01G20030 | No description available. | Chr1 | + | View |
CL11G14710 | No description available. | Chr11 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00059G01340 | No description available. | CM3.5_scaffold00059 | + | View |
CM00007G08970 | No description available. | CM3.5_scaffold00007 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00006G01670 | No description available. | supercontig_6 | + | View |
CP00099G00370 | No description available. | supercontig_99 | + | View |
CP00106G00090 | No description available. | supercontig_106 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_007G03590 | No description available. | scaffold_7 | + | View |
CRU_003G31080 | No description available. | scaffold_3 | - | View |
CRU_002G20970 | No description available. | scaffold_2 | - | View |
CRU_007G05390 | No description available. | scaffold_7 | - | View |
CRU_007G00970 | No description available. | scaffold_7 | + | View |
CRU_001G18390 | No description available. | scaffold_1 | - | View |
CRU_008G16060 | No description available. | scaffold_8 | + | View |
CRU_003G29010 | No description available. | scaffold_3 | + | View |
CRU_004G00570 | No description available. | scaffold_4 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00017G00300 | No description available. | scaffold00017 | + | View |
CS00287G00080 | No description available. | scaffold00287 | + | View |
CS00002G04590 | No description available. | scaffold00002 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0009G10300 | No description available. | scaffold_9 | + | View |
EG0006G12900 | No description available. | scaffold_6 | - | View |
EG0007G12040 | No description available. | scaffold_7 | - | View |
EG0009G20260 | No description available. | scaffold_9 | - | View |
EG0006G15250 | No description available. | scaffold_6 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV2G50480 | Sec14 cytosolic factor (PI/PC TP) (probable) | LG2 | + | View |
FV2G00690 | Sec14 cytosolic factor (PI/PC TP) (probable) | LG2 | + | View |
FV1G14700 | Sec14 cytosolic factor (PI/PC TP) (probable) | LG1 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM11G07661 | No description available. | Gm11 | + | View |
GM04G03230 | No description available. | Gm04 | + | View |
GM11G12260 | No description available. | Gm11 | + | View |
GM17G37150 | No description available. | Gm17 | - | View |
GM04G01220 | No description available. | Gm04 | + | View |
GM06G03300 | No description available. | Gm06 | + | View |
GM02G05980 | No description available. | Gm02 | - | View |
GM01G37640 | No description available. | Gm01 | - | View |
GM12G04453 | No description available. | Gm12 | + | View |
GM14G07850 | No description available. | Gm14 | + | View |
GM16G24670 | No description available. | Gm16 | - | View |
GM06G01260 | No description available. | Gm06 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR13G03530 | No description available. | Chr13 | + | View |
GR03G01300 | No description available. | Chr03 | - | View |
GR05G10920 | No description available. | Chr05 | - | View |
GR08G03030 | No description available. | Chr08 | + | View |
GR12G15510 | No description available. | Chr12 | - | View |
GR07G20070 | No description available. | Chr07 | - | View |
GR05G24550 | No description available. | Chr05 | + | View |
GR09G19980 | No description available. | Chr09 | + | View |
GR11G10070 | No description available. | Chr11 | - | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ1G043470 | No description available. | chr1 | + | View |
LJ3G047330 | No description available. | chr3 | + | View |
LJ5G002050 | No description available. | chr5 | - | View |
LJ2G030170 | No description available. | chr2 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD11G018760 | No description available. | 11 | + | View |
MD08G001670 | No description available. | 8 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME06512G00460 | No description available. | scaffold06512 | + | View |
ME08122G00100 | No description available. | scaffold08122 | + | View |
ME07520G02040 | No description available. | scaffold07520 | + | View |
ME07012G00860 | No description available. | scaffold07012 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT3G117090 | Sec14p-like phosphatidylinositol transfer family protein | chr3 | + | View |
MT3G112150 | Sec14p-like phosphatidylinositol transfer family protein | chr3 | - | View |
MT4G070720 | Sec14p-like phosphatidylinositol transfer family protein | chr4 | + | View |
MT8G076880 | Sec14p-like phosphatidylinositol transfer family protein | chr8 | - | View |
MT6G015645 | Sec14p-like phosphatidylinositol transfer family protein | chr6 | + | View |
MT1G022480 | Sec14p-like phosphatidylinositol transfer family protein | chr1 | - | View |
MT5G021050 | Sec14p-like phosphatidylinositol transfer family protein | chr5 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS01G50616 | phosphatidylinositol transfer, putative, expressed | 1 | - | View |
OS02G04020 | No description available. | 2 | + | View |
OS05G46720 | phosphatidylinositol transfer, putative, expressed | 5 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_007G18090 | No description available. | scaffold_7 | + | View |
PPE_001G38330 | No description available. | scaffold_1 | + | View |
PPE_008G11000 | No description available. | scaffold_8 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT09G11940 | No description available. | Chr09 | + | View |
PT05G23050 | No description available. | Chr05 | - | View |
PT05G11970 | No description available. | Chr05 | - | View |
PT04G15760 | No description available. | Chr04 | + | View |
PT02G03260 | No description available. | Chr02 | + | View |
PT07G02030 | No description available. | Chr07 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30131G02240 | No description available. | 30131 | + | View |
RC29634G00270 | No description available. | 29634 | - | View |
RC30170G04360 | No description available. | 30170 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL04G080690 | SEC14-like protein (AHRD V1 **-- Q9T027_ARATH)%3B contains Interpro domain(s) IPR001251 Cellular retinaldehyde-binding/triple function%2C C-terminal | ch04 | - | View |
SL01G109860 | Phosphatidylinositol/phosphatidylcholine transfer protein-like (AHRD V1 **-* Q9LRX7_ARATH)%3B contains Interpro domain(s) IPR001251 Cellular retinaldehyde-binding/triple function%2C C-terminal | ch01 | + | View |
SL10G053900 | SEC14-like protein (AHRD V1 **-- Q9T027_ARATH)%3B contains Interpro domain(s) IPR001251 Cellular retinaldehyde-binding/triple function%2C C-terminal | ch10 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST01G047280 | SEC14 cytosolic factor family protein (AHRD V1 *--- D7KN07_ARALY); contains Interpro domain(s) IPR001251 Cellular retinaldehyde-binding/triple function, C-terminal | chr01 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0001G02680 | No description available. | scaffold_1 | - | View |
TC0002G07700 | No description available. | scaffold_2 | + | View |
TC0008G03070 | No description available. | scaffold_8 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP7G34120 | similar to AT4G36490|SFH12 (SEC14-LIKE 12) | ch7-6 | - | View |
TP3G31610 | similar to AT2G18180|SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative | ch3-6 | - | View |
TP1G17490 | similar to AT1G19650|SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative | ch1-1 | - | View |
TP7G32370 | similar to AT4G34580|COW1 (CAN OF WORMS1) | ch7-5 | + | View |
TP7G36640 | similar to AT4G39180|SEC14 | ch7-6 | + | View |
TP5G30510 | similar to AT1G75370|SEC14 cytosolic factor, putative / phosphatidylinositol transfer-like protein, putative | ch5-7 | - | View |
TP6G18010 | similar to AT5G56160|transporter | ch6-6 | + | View |
TP3G29610 | similar to AT2G16380|SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein | ch3-5 | + | View |
TP4G00680 | similar to AT2G21520|transporter | ch4-1 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV03G02840 | name=GSVIVG01023815001; | chr3 | + | View |
VV04G01590 | name=GSVIVG01018887001; | chr4 | + | View |
VV18G09350 | name=GSVIVG01009759001; | chr18 | - | View |