Anchorpoints

Gene id
AT1G18080
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT3G18130receptor for activated C kinase 1C (RACK1C_AT); FUNCTIONS IN: nucleotide binding; INVOLVED IN: shoot development, root development; LOCATED IN: nucleolus, heterotrimeric G-protein complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: receptor for activated C kinase 1B (TAIR:AT1G48630.1); Has 88582 Blast hits to 37057 proteins in 965 species: Archae - 74; Bacteria - 10338; Metazoa - 34853; Fungi - 20136; Plants - 11319; Viruses - 6; Other Eukaryotes - 11856 (source: NCBI BLink). Encodes a protein with similarity to mammalian RACKs. RACKs function to shuttle activated protein kinase C to different subcellular sites and may also function as a scaffold through physical interactions with other proteins. RACK1C has no phenotype on its own and probably acts redundantly with RACK1A and RACK1B. receptor for activated C kinase 1C3-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G19570No description available.scaffold_3-View
AL1G42310No description available.scaffold_1-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR09G46310No description available.A09-View
BR06G12850No description available.A06+View
BR05G25580No description available.A05+View
BR08G26180No description available.A08-View
BR06G04040No description available.A06+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV5G21160No description available.Bvchr5.sca016-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL06G15020No description available.Chr6-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00030G02690No description available.CM3.5_scaffold00030-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00003G04250No description available.supercontig_3+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G17070No description available.scaffold_3-View
CRU_001G16980No description available.scaffold_1+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00044G00240No description available.scaffold00044+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0011G18760No description available.scaffold_11+View
EG0002G07120No description available.scaffold_2+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV5G16990Guanine nucleotide-binding protein subunit beta-like protein (similar to)LG5-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM05G34070No description available.Gm05-View
GM08G05610No description available.Gm08+View
GM07G11340No description available.Gm07-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G28880No description available.Chr08+View
GR06G19260No description available.Chr06-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ4G050990No description available.chr4+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD06G018870No description available.6+View
MD14G021690No description available.14+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06631G00240No description available.scaffold06631+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT8G106790guanine nucleotide-binding protein beta subunit-like proteinchr8+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_005G23120No description available.scaffold_5+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT15G04160No description available.Chr15-View
PT12G04960No description available.Chr12-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G069010Guanine nucleotide-binding protein beta subunit-like protein (AHRD V1 **-* B6SJ21_MAIZE)%3B contains Interpro domain(s) IPR020472 G-protein beta WD-40 repeat%2C regionch06+View
SL12G040510Guanine nucleotide-binding protein beta subunit-like protein (AHRD V1 **-- B6SJ21_MAIZE)%3B contains Interpro domain(s) IPR020472 G-protein beta WD-40 repeat%2C regionch12+View
SL03G119040Guanine nucleotide-binding protein beta subunit-like protein (AHRD V1 **-* B4FKM1_MAIZE)%3B contains Interpro domain(s) IPR020472 G-protein beta WD-40 repeat%2C regionch03-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST03G032510Guanine nucleotide-binding protein beta subunit-like protein (AHRD V1 **-* B6SJ21_MAIZE); contains Interpro domain(s) IPR017986 WD40 repeat, regionchr03-View
ST06G025890Guanine nucleotide-binding protein beta subunit-like protein (AHRD V1 **-* B6SJ21_MAIZE); contains Interpro domain(s) IPR017986 WD40 repeat, regionchr06-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G35600similar to AT1G48630|RACK1B_AT (RECEPTOR FOR ACTIVATED C KINASE 1 B)ch1-2-View
TP3G16240similar to AT3G18130|RACK1C_AT (RECEPTOR FOR ACTIVATED C KINASE 1 C)ch3-1-View
TP1G16100similar to AT1G18080|ATARCAch1-1+View


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Gene id
Species
Description
Chromosome
Strand