Anchorpoints

Gene id
AT1G17520
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G72740Homeodomain-like/winged-helix DNA-binding family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: nucleosome assembly, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like/winged-helix DNA-binding family protein (TAIR:AT1G17520.1); Has 801 Blast hits to 789 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 83; Fungi - 63; Plants - 602; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). Homeodomain-like/winged-helix DNA-binding family protein1-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL2G21540No description available.scaffold_2-View
AL1G49480No description available.scaffold_1+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR08G26460No description available.A08+View
BR06G12490No description available.A06-View
BR09G46530No description available.A09+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV0G78370No description available.Bvchr8_un.sca001-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL07G12310No description available.Chr7-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00025G00830No description available.supercontig_25-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_002G18490No description available.scaffold_2-View
CRU_001G16500No description available.scaffold_1-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00032G00860No description available.scaffold00032+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0010G24270No description available.scaffold_10+View
EG0003G07120No description available.scaffold_3+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV1G09420Telomeric repeat-binding factor 2 (probable)LG1-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM07G00930No description available.Gm07+View
GM08G20270No description available.Gm08+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR09G14300No description available.Chr09-View
GR01G01300No description available.Chr01+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD15G015040No description available.15-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME10493G00820No description available.scaffold10493+View
ME05875G00810No description available.scaffold05875-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT8G018410MYB transcription factor MYB91chr8-View
MT2G099600No description available.chr2+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_007G22550No description available.scaffold_7+View
PPE_003G03140No description available.scaffold_3+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT18G06630No description available.Chr18-View
PT06G14740No description available.Chr06+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29706G00570No description available.29706+View
RC29912G00760No description available.29912-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL03G121840Histone H1-like protein (AHRD V1 *-*- Q8W119_MAIZE)%3B contains Interpro domain(s) IPR005818 Histone H1/H5ch03-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST03G035090Single myb histone (AHRD V1 **-- B9N5F4_POPTR); contains Interpro domain(s) IPR005818 Histone H1/H5chr03+View
ST07G014350Single myb histone (AHRD V1 **-* B9N5F4_POPTR); contains Interpro domain(s) IPR005818 Histone H1/H5chr07+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0006G11480No description available.scaffold_6-View
TC0009G08100No description available.scaffold_9+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G27800similar to AT1G72740|DNA-binding family protein / histone H1/H5 family proteinch5-6-View
TP1G15660similar to AT1G17520|DNA-binding protein, putativech1-1-View
TP1G40670similar to AT1G54260|histone H1/H5 family proteinch1-2+View


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Gene id
Species
Description
Chromosome
Strand