Anchorpoints
- Gene id
- AT1G17520
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G72740 | Homeodomain-like/winged-helix DNA-binding family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: nucleosome assembly, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like/winged-helix DNA-binding family protein (TAIR:AT1G17520.1); Has 801 Blast hits to 789 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 83; Fungi - 63; Plants - 602; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). Homeodomain-like/winged-helix DNA-binding family protein | 1 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL2G21540 | No description available. | scaffold_2 | - | View |
AL1G49480 | No description available. | scaffold_1 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR08G26460 | No description available. | A08 | + | View |
BR06G12490 | No description available. | A06 | - | View |
BR09G46530 | No description available. | A09 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV0G78370 | No description available. | Bvchr8_un.sca001 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL07G12310 | No description available. | Chr7 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00025G00830 | No description available. | supercontig_25 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_002G18490 | No description available. | scaffold_2 | - | View |
CRU_001G16500 | No description available. | scaffold_1 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00032G00860 | No description available. | scaffold00032 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0010G24270 | No description available. | scaffold_10 | + | View |
EG0003G07120 | No description available. | scaffold_3 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV1G09420 | Telomeric repeat-binding factor 2 (probable) | LG1 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM07G00930 | No description available. | Gm07 | + | View |
GM08G20270 | No description available. | Gm08 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR09G14300 | No description available. | Chr09 | - | View |
GR01G01300 | No description available. | Chr01 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD15G015040 | No description available. | 15 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME10493G00820 | No description available. | scaffold10493 | + | View |
ME05875G00810 | No description available. | scaffold05875 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT8G018410 | MYB transcription factor MYB91 | chr8 | - | View |
MT2G099600 | No description available. | chr2 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_007G22550 | No description available. | scaffold_7 | + | View |
PPE_003G03140 | No description available. | scaffold_3 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT18G06630 | No description available. | Chr18 | - | View |
PT06G14740 | No description available. | Chr06 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29706G00570 | No description available. | 29706 | + | View |
RC29912G00760 | No description available. | 29912 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL03G121840 | Histone H1-like protein (AHRD V1 *-*- Q8W119_MAIZE)%3B contains Interpro domain(s) IPR005818 Histone H1/H5 | ch03 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST03G035090 | Single myb histone (AHRD V1 **-- B9N5F4_POPTR); contains Interpro domain(s) IPR005818 Histone H1/H5 | chr03 | + | View |
ST07G014350 | Single myb histone (AHRD V1 **-* B9N5F4_POPTR); contains Interpro domain(s) IPR005818 Histone H1/H5 | chr07 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0006G11480 | No description available. | scaffold_6 | - | View |
TC0009G08100 | No description available. | scaffold_9 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP5G27800 | similar to AT1G72740|DNA-binding family protein / histone H1/H5 family protein | ch5-6 | - | View |
TP1G15660 | similar to AT1G17520|DNA-binding protein, putative | ch1-1 | - | View |
TP1G40670 | similar to AT1G54260|histone H1/H5 family protein | ch1-2 | + | View |