Anchorpoints

Gene id
AT1G15940
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G80810Tudor/PWWP/MBT superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT1G15940.1); Has 103396 Blast hits to 54411 proteins in 2510 species: Archae - 599; Bacteria - 9234; Metazoa - 41155; Fungi - 13255; Plants - 5790; Viruses - 1058; Other Eukaryotes - 32305 (source: NCBI BLink). Tudor/PWWP/MBT superfamily protein1+View
AT5G10950Tudor/PWWP/MBT superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT1G80810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). Tudor/PWWP/MBT superfamily protein5-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL6G10690No description available.scaffold_6-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR01G05900No description available.A01+View
BR06G11250No description available.A06+View
BR07G18270No description available.A07+View
BR09G47310No description available.A09-View
BR08G26940No description available.A08-View
BR07G34330No description available.A07-View
BR03G52600No description available.A03-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV2G11570No description available.Bvchr2.sca001+View
BV9G18960No description available.Bvchr9.sca026-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL09G02890No description available.Chr9+View
CL08G13450No description available.Chr8+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00014G06620No description available.CM3.5_scaffold00014+View
CM00060G01110No description available.CM3.5_scaffold00060+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00010G00750No description available.supercontig_10-View
CP00127G00180No description available.supercontig_127+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G15040No description available.scaffold_1+View
CRU_002G25290No description available.scaffold_2-View
CRU_007G08210No description available.scaffold_7+View
CRU_006G09200No description available.scaffold_6-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00025G01530No description available.scaffold00025-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0003G20950No description available.scaffold_3-View
EG0010G26560No description available.scaffold_10+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G24710Sister chromatid cohesion protein PDS5 homolog B-B (probable)LG6-View
FV2G52230Sister chromatid cohesion protein PDS5 (probable)LG2+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM07G02705No description available.Gm07-View
GM12G16803No description available.Gm12-View
GM06G06630No description available.Gm06-View
GM08G23272No description available.Gm08+View
GM04G06560No description available.Gm04-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR09G06190No description available.Chr09+View
GR10G11800No description available.Chr10-View
GR01G03720No description available.Chr01+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ1G026130No description available.chr1+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD08G006530No description available.8-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME00847G02200No description available.scaffold00847+View
ME03049G00370No description available.scaffold03049+View
ME02915G00300No description available.scaffold02915-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT3G106100nucleic acid-binding protein C putativechr3-View
MT1G014300nucleic acid-binding protein C putativechr1+View
MT4G006875sister chromatid cohesion PDS5-like proteinchr4+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G39950No description available.scaffold_1+View
PPE_003G08430No description available.scaffold_3+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT03G18130No description available.Chr03+View
PT01G04650No description available.Chr01-View
PT06G18670No description available.Chr06-View
PT06G26330No description available.Chr06+View
PT18G10960No description available.Chr18-View
PT18G02040No description available.Chr18-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29848G01030No description available.29848-View
RC29588G00080No description available.29588+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G068430Sister chromatid cohesion protein PDS5 homolog A (AHRD V1 *--- PDS5A_MOUSE)%3B contains Interpro domain(s) IPR002999 Tudor domainch06+View
SL03G116920Sister chromatid cohesion protein PDS5 homolog A (AHRD V1 *--- PDS5A_CHICK)ch03-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST06G023940T24D18.4 (Fragment) (AHRD V1 **-- Q0WPH2_ARATH)chr06-View
ST03G030370BRI1-KD interacting protein 135 (AHRD V1 *-*- Q6K624_ORYSJ)chr03-View
ST06G024760Sister chromatid cohesion protein PDS5 homolog B-B (AHRD V1 *--- PD5BB_XENLA); contains Interpro domain(s) IPR010874 Telomere-binding beta subunitchr06-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0009G01630No description available.scaffold_9-View
TC0006G03930No description available.scaffold_6+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G14250similar to AT1G15940|bindingch1-1+View
TP7G29700No description available.ch7-5-View
TP5G34950similar to AT1G80810|bindingch5-7-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV09G11330name=GSVIVG01038453001;chr9-View
VV11G07090name=GSVIVG01023587001;chr11-View
VV04G12440name=GSVIVG01035890001;chr4-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM02G10840No description available.2+View


Download

Gene id
Species
Description
Chromosome
Strand