Anchorpoints
- Gene id
- AT1G15940
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G80810 | Tudor/PWWP/MBT superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT1G15940.1); Has 103396 Blast hits to 54411 proteins in 2510 species: Archae - 599; Bacteria - 9234; Metazoa - 41155; Fungi - 13255; Plants - 5790; Viruses - 1058; Other Eukaryotes - 32305 (source: NCBI BLink). Tudor/PWWP/MBT superfamily protein | 1 | + | View |
AT5G10950 | Tudor/PWWP/MBT superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT1G80810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). Tudor/PWWP/MBT superfamily protein | 5 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL6G10690 | No description available. | scaffold_6 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR01G05900 | No description available. | A01 | + | View |
BR06G11250 | No description available. | A06 | + | View |
BR07G18270 | No description available. | A07 | + | View |
BR09G47310 | No description available. | A09 | - | View |
BR08G26940 | No description available. | A08 | - | View |
BR07G34330 | No description available. | A07 | - | View |
BR03G52600 | No description available. | A03 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV2G11570 | No description available. | Bvchr2.sca001 | + | View |
BV9G18960 | No description available. | Bvchr9.sca026 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL09G02890 | No description available. | Chr9 | + | View |
CL08G13450 | No description available. | Chr8 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00014G06620 | No description available. | CM3.5_scaffold00014 | + | View |
CM00060G01110 | No description available. | CM3.5_scaffold00060 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00010G00750 | No description available. | supercontig_10 | - | View |
CP00127G00180 | No description available. | supercontig_127 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_001G15040 | No description available. | scaffold_1 | + | View |
CRU_002G25290 | No description available. | scaffold_2 | - | View |
CRU_007G08210 | No description available. | scaffold_7 | + | View |
CRU_006G09200 | No description available. | scaffold_6 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00025G01530 | No description available. | scaffold00025 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0003G20950 | No description available. | scaffold_3 | - | View |
EG0010G26560 | No description available. | scaffold_10 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV6G24710 | Sister chromatid cohesion protein PDS5 homolog B-B (probable) | LG6 | - | View |
FV2G52230 | Sister chromatid cohesion protein PDS5 (probable) | LG2 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM07G02705 | No description available. | Gm07 | - | View |
GM12G16803 | No description available. | Gm12 | - | View |
GM06G06630 | No description available. | Gm06 | - | View |
GM08G23272 | No description available. | Gm08 | + | View |
GM04G06560 | No description available. | Gm04 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR09G06190 | No description available. | Chr09 | + | View |
GR10G11800 | No description available. | Chr10 | - | View |
GR01G03720 | No description available. | Chr01 | + | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ1G026130 | No description available. | chr1 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD08G006530 | No description available. | 8 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME00847G02200 | No description available. | scaffold00847 | + | View |
ME03049G00370 | No description available. | scaffold03049 | + | View |
ME02915G00300 | No description available. | scaffold02915 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT3G106100 | nucleic acid-binding protein C putative | chr3 | - | View |
MT1G014300 | nucleic acid-binding protein C putative | chr1 | + | View |
MT4G006875 | sister chromatid cohesion PDS5-like protein | chr4 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_001G39950 | No description available. | scaffold_1 | + | View |
PPE_003G08430 | No description available. | scaffold_3 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT03G18130 | No description available. | Chr03 | + | View |
PT01G04650 | No description available. | Chr01 | - | View |
PT06G18670 | No description available. | Chr06 | - | View |
PT06G26330 | No description available. | Chr06 | + | View |
PT18G10960 | No description available. | Chr18 | - | View |
PT18G02040 | No description available. | Chr18 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29848G01030 | No description available. | 29848 | - | View |
RC29588G00080 | No description available. | 29588 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL06G068430 | Sister chromatid cohesion protein PDS5 homolog A (AHRD V1 *--- PDS5A_MOUSE)%3B contains Interpro domain(s) IPR002999 Tudor domain | ch06 | + | View |
SL03G116920 | Sister chromatid cohesion protein PDS5 homolog A (AHRD V1 *--- PDS5A_CHICK) | ch03 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST06G023940 | T24D18.4 (Fragment) (AHRD V1 **-- Q0WPH2_ARATH) | chr06 | - | View |
ST03G030370 | BRI1-KD interacting protein 135 (AHRD V1 *-*- Q6K624_ORYSJ) | chr03 | - | View |
ST06G024760 | Sister chromatid cohesion protein PDS5 homolog B-B (AHRD V1 *--- PD5BB_XENLA); contains Interpro domain(s) IPR010874 Telomere-binding beta subunit | chr06 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0009G01630 | No description available. | scaffold_9 | - | View |
TC0006G03930 | No description available. | scaffold_6 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP1G14250 | similar to AT1G15940|binding | ch1-1 | + | View |
TP7G29700 | No description available. | ch7-5 | - | View |
TP5G34950 | similar to AT1G80810|binding | ch5-7 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV09G11330 | name=GSVIVG01038453001; | chr9 | - | View |
VV11G07090 | name=GSVIVG01023587001; | chr11 | - | View |
VV04G12440 | name=GSVIVG01035890001; | chr4 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM02G10840 | No description available. | 2 | + | View |