Anchorpoints
- Gene id
- AT1G14260
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT2G02960 | RING/FYVE/PHD zinc finger superfamily protein RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G14260.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | 2 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL5G02510 | No description available. | scaffold_5 | - | View |
AL1G15000 | No description available. | scaffold_1 | + | View |
Amborella trichopoda
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ATR_00010G04470 | No description available. | scaffold00010 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR09G48330 | No description available. | A09 | - | View |
BR06G09470 | No description available. | A06 | + | View |
BR06G34730 | No description available. | A06 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV6G02670 | No description available. | Bvchr6.sca028 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL05G25250 | No description available. | Chr5 | + | View |
CL04G12030 | No description available. | Chr4 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00009G00430 | No description available. | CM3.5_scaffold00009 | + | View |
CM00016G04200 | No description available. | CM3.5_scaffold00016 | - | View |
CM00001G00740 | No description available. | CM3.5_scaffold00001 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00128G00250 | No description available. | supercontig_128 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_001G13310 | No description available. | scaffold_1 | + | View |
CRU_005G01690 | No description available. | scaffold_5 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00015G01700 | No description available. | scaffold00015 | - | View |
CS00003G04320 | No description available. | scaffold00003 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0002G04320 | No description available. | scaffold_2 | - | View |
EG0002G28590 | No description available. | scaffold_2 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV6G44410 | E3 ubiquitin-protein ligase MARCH1 (MARCH-I) (probable) | LG6 | - | View |
FV0G05530 | E3 ubiquitin-protein ligase MARCH3 (MARCH-III) (probable) | scf0513158 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM02G11960 | No description available. | Gm02 | - | View |
GM06G20860 | No description available. | Gm06 | - | View |
GM01G05800 | No description available. | Gm01 | + | View |
GM04G33580 | No description available. | Gm04 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR08G19310 | No description available. | Chr08 | - | View |
GR05G14160 | No description available. | Chr05 | - | View |
GR13G08560 | No description available. | Chr13 | - | View |
GR08G18100 | No description available. | Chr08 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD09G003670 | No description available. | 9 | - | View |
MD13G004690 | No description available. | 13 | + | View |
MD16G003810 | No description available. | 16 | + | View |
MD17G004060 | No description available. | 17 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME03834G00030 | No description available. | scaffold03834 | + | View |
ME11495G00240 | No description available. | scaffold11495 | + | View |
ME08359G02330 | No description available. | scaffold08359 | + | View |
ME12794G02190 | No description available. | scaffold12794 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT5G040650 | RING/FYVE/PHD zinc finger protein | chr5 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_003G24640 | No description available. | scaffold_3 | + | View |
PPE_001G28620 | No description available. | scaffold_1 | - | View |
PPE_005G19850 | No description available. | scaffold_5 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT08G08630 | No description available. | Chr08 | - | View |
PT10G16920 | No description available. | Chr10 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29813G00390 | No description available. | 29813 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL05G007660 | E3 ubiquitin-protein ligase MARCH3 (AHRD V1 *--- B5X3M1_SALSA)%3B contains Interpro domain(s) IPR011016 Zinc finger%2C RING-CH-type | ch05 | - | View |
SL01G010880 | E3 ubiquitin-protein ligase MARCH3 (AHRD V1 *--- B5X3M1_SALSA)%3B contains Interpro domain(s) IPR011016 Zinc finger%2C RING-CH-type | ch01 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST01G014650 | E3 ubiquitin-protein ligase MARCH3 (AHRD V1 *--- B5X3M1_SALSA); contains Interpro domain(s) IPR011016 Zinc finger, RING-CH-type | chr01 | - | View |
ST03G029490 | E3 ubiquitin-protein ligase MARCH3 (AHRD V1 *--- MARH3_MOUSE); contains Interpro domain(s) IPR011016 Zinc finger, RING-CH-type | chr03 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0002G34440 | No description available. | scaffold_2 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP1G12610 | similar to AT1G14260|zinc finger (C3HC4-type RING finger) family protein | ch1-1 | + | View |
TP2G14000 | similar to AT2G02960|zinc finger (C3HC4-type RING finger) family protein | ch2-4 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV17G03680 | name=GSVIVG01008001001; | chr17 | - | View |
VV01G12050 | name=GSVIVG01019978001; | chr1 | - | View |