Anchorpoints

Gene id
AT1G10570
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G60220UB-like protease 1D (ULP1D); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT1G10570.2); Has 2556 Blast hits to 2339 proteins in 246 species: Archae - 0; Bacteria - 12; Metazoa - 1276; Fungi - 441; Plants - 318; Viruses - 13; Other Eukaryotes - 496 (source: NCBI BLink). UB-like protease 1D Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sGFP:OTS1 protein accumulates in the nucleus. Double mutant analysis with ULP1C/OTS2 indicates that these genes are involved in salt stress responses and flowering time regulation. Over-expression of 35S:OTS1 increases salt tolerance and reduces the level of SUMO-conjugated proteins. OTS1 transcript levels do not appear to change in response to salt, but, salt stress reduces the level of OTS1 protein in a proteasome-dependent manner.1+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL2G05880No description available.scaffold_2-View
AL1G10540No description available.scaffold_1+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR09G14780No description available.A09-View
BR06G06920No description available.A06+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV6G09920No description available.Bvchr6.sca027-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL05G26210No description available.Chr5+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00016G03170No description available.CM3.5_scaffold00016-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00069G00220No description available.supercontig_69+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G09570No description available.scaffold_1+View
CRU_002G04760No description available.scaffold_2-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00003G02670No description available.scaffold00003-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0008G21110No description available.scaffold_8-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV4G21830Sentrin-specific protease 2 (Axam) (probable)LG4-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM18G18951No description available.Gm18+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR12G17140No description available.Chr12+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G26560No description available.scaffold_1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G04060No description available.Chr10+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29631G00150No description available.29631+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL05G005630Sentrin/SUMO-specific protease 15 (AHRD V1 *-** Q6IE03_MOUSE)%3B contains Interpro domain(s) IPR003653 Peptidase C48%2C SUMO/Sentrin/Ubl1ch05+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0002G24800No description available.scaffold_2+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G09220similar to AT1G10570|OTS2 (OVERLY TOLERANT TO SALT 2)ch1-1+View
TP2G04460similar to AT1G60220|ULP1D (UB-LIKE PROTEASE 1D)ch2-2-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV01G13930name=GSVIVG01020235001;chr1-View


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Gene id
Species
Description
Chromosome
Strand