Anchorpoints

Gene id
AT1G07720
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT2G286303-ketoacyl-CoA synthase 12 (KCS12); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity; INVOLVED IN: response to osmotic stress; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 3 (TAIR:AT1G07720.1); Has 2195 Blast hits to 2173 proteins in 528 species: Archae - 0; Bacteria - 1011; Metazoa - 0; Fungi - 4; Plants - 1037; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). Encodes KCS12, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). 3-ketoacyl-CoA synthase 122-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G07300No description available.scaffold_1-View
AL4G13050No description available.scaffold_4-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR08G30030No description available.A08-View
BR07G13320No description available.A07-View
BR06G04650No description available.A06+View
BR04G16680No description available.A04-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV7G07270No description available.Bvchr7.sca021+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL02G13870No description available.Chr2-View
CL02G20790No description available.Chr2-View
CL03G01750No description available.Chr3+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00063G00090No description available.CM3.5_scaffold00063-View
CM00020G02230No description available.CM3.5_scaffold00020-View
CM00044G02060No description available.CM3.5_scaffold00044+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_004G09400No description available.scaffold_4-View
CRU_001G06680No description available.scaffold_1-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00014G01100No description available.scaffold00014+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0010G18170No description available.scaffold_10+View
EG0002G19350No description available.scaffold_2+View
EG0010G10220No description available.scaffold_10-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV7G045803-ketoacyl-CoA synthase 1 (KCS-1) (similar to)LG7-View
FV0G323503-ketoacyl-CoA synthase 12 (KCS-12), Precursor (similar to)scf0513178+View
FV7G253403-ketoacyl-CoA synthase 21 (KCS-21) (similar to)LG7-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM10G43800No description available.Gm10+View
GM15G04760No description available.Gm15+View
GM13G40670No description available.Gm13-View
GM03G42140No description available.Gm03+View
GM12G08010No description available.Gm12-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR09G10230No description available.Chr09+View
GR11G24510No description available.Chr11-View
GR01G10730No description available.Chr01-View
GR10G20280No description available.Chr10+View
GR11G24900No description available.Chr11+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ5G040880No description available.chr5+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD11G008780No description available.11+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME00506G00400No description available.scaffold00506-View
ME03750G00180No description available.scaffold03750+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT4G0621703-ketoacyl-CoA synthase-like proteinchr4-View
MT1G1155603-ketoacyl-CoA synthase-like proteinchr1+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G083603-ketoacyl-CoA synthase 10, putative, expressed3+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G08510No description available.scaffold_6+View
PPE_001G02520No description available.scaffold_1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT08G04850No description available.Chr08-View
PT09G02680No description available.Chr09-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL11G0729803-ketoacyl-CoA synthase 6 (AHRD V1 ***- A9XU47_GOSHI)%3B contains Interpro domain(s) IPR012392 Very-long-chain 3-ketoacyl-CoA synthasech11-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST11G0297903-ketoacyl-CoA synthase (AHRD V1 ***- B9HPL4_POPTR); contains Interpro domain(s) IPR012392 Very-long-chain 3-ketoacyl-CoA synthasechr11-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0010G05380No description available.scaffold_10r-View
TC0009G32400No description available.scaffold_9+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G06480similar to AT1G07720|KCS3 (3-KETOACYL-COA SYNTHASE 3)ch1-1+View
TP4G11490similar to AT2G28630|KCS12 (3-KETOACYL-COA SYNTHASE 12)ch4-6-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV06G04290name=GSVIVG01025052001;chr6-View


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Gene id
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Description
Chromosome
Strand