Anchorpoints
- Gene id
- AT1G07720
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT2G28630 | 3-ketoacyl-CoA synthase 12 (KCS12); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity; INVOLVED IN: response to osmotic stress; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 3 (TAIR:AT1G07720.1); Has 2195 Blast hits to 2173 proteins in 528 species: Archae - 0; Bacteria - 1011; Metazoa - 0; Fungi - 4; Plants - 1037; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). Encodes KCS12, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). 3-ketoacyl-CoA synthase 12 | 2 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL1G07300 | No description available. | scaffold_1 | - | View |
AL4G13050 | No description available. | scaffold_4 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR08G30030 | No description available. | A08 | - | View |
BR07G13320 | No description available. | A07 | - | View |
BR06G04650 | No description available. | A06 | + | View |
BR04G16680 | No description available. | A04 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV7G07270 | No description available. | Bvchr7.sca021 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL02G13870 | No description available. | Chr2 | - | View |
CL02G20790 | No description available. | Chr2 | - | View |
CL03G01750 | No description available. | Chr3 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00063G00090 | No description available. | CM3.5_scaffold00063 | - | View |
CM00020G02230 | No description available. | CM3.5_scaffold00020 | - | View |
CM00044G02060 | No description available. | CM3.5_scaffold00044 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_004G09400 | No description available. | scaffold_4 | - | View |
CRU_001G06680 | No description available. | scaffold_1 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00014G01100 | No description available. | scaffold00014 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0010G18170 | No description available. | scaffold_10 | + | View |
EG0002G19350 | No description available. | scaffold_2 | + | View |
EG0010G10220 | No description available. | scaffold_10 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV7G04580 | 3-ketoacyl-CoA synthase 1 (KCS-1) (similar to) | LG7 | - | View |
FV0G32350 | 3-ketoacyl-CoA synthase 12 (KCS-12), Precursor (similar to) | scf0513178 | + | View |
FV7G25340 | 3-ketoacyl-CoA synthase 21 (KCS-21) (similar to) | LG7 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM10G43800 | No description available. | Gm10 | + | View |
GM15G04760 | No description available. | Gm15 | + | View |
GM13G40670 | No description available. | Gm13 | - | View |
GM03G42140 | No description available. | Gm03 | + | View |
GM12G08010 | No description available. | Gm12 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR09G10230 | No description available. | Chr09 | + | View |
GR11G24510 | No description available. | Chr11 | - | View |
GR01G10730 | No description available. | Chr01 | - | View |
GR10G20280 | No description available. | Chr10 | + | View |
GR11G24900 | No description available. | Chr11 | + | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ5G040880 | No description available. | chr5 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD11G008780 | No description available. | 11 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME00506G00400 | No description available. | scaffold00506 | - | View |
ME03750G00180 | No description available. | scaffold03750 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT4G062170 | 3-ketoacyl-CoA synthase-like protein | chr4 | - | View |
MT1G115560 | 3-ketoacyl-CoA synthase-like protein | chr1 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS03G08360 | 3-ketoacyl-CoA synthase 10, putative, expressed | 3 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_006G08510 | No description available. | scaffold_6 | + | View |
PPE_001G02520 | No description available. | scaffold_1 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT08G04850 | No description available. | Chr08 | - | View |
PT09G02680 | No description available. | Chr09 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL11G072980 | 3-ketoacyl-CoA synthase 6 (AHRD V1 ***- A9XU47_GOSHI)%3B contains Interpro domain(s) IPR012392 Very-long-chain 3-ketoacyl-CoA synthase | ch11 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST11G029790 | 3-ketoacyl-CoA synthase (AHRD V1 ***- B9HPL4_POPTR); contains Interpro domain(s) IPR012392 Very-long-chain 3-ketoacyl-CoA synthase | chr11 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0010G05380 | No description available. | scaffold_10r | - | View |
TC0009G32400 | No description available. | scaffold_9 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP1G06480 | similar to AT1G07720|KCS3 (3-KETOACYL-COA SYNTHASE 3) | ch1-1 | + | View |
TP4G11490 | similar to AT2G28630|KCS12 (3-KETOACYL-COA SYNTHASE 12) | ch4-6 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV06G04290 | name=GSVIVG01025052001; | chr6 | - | View |