Anchorpoints
- Gene id
- AT1G05630
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT2G31830 | Encodes a 5-inositol-polyphosphate phosphatase, that, in vitro, shows some activity against Ins(1,4,5)P3 and PI(3,4,5)P3, but even higher activity against PI(4,5)P2 endonuclease/exonuclease/phosphatase family protein endonuclease/exonuclease/phosphatase family protein; FUNCTIONS IN: inositol or phosphatidylinositol phosphatase activity; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135), Quinoprotein amine dehydrogenase, beta chain-like (InterPro:IPR011044); BEST Arabidopsis thaliana protein match is: Endonuclease/exonuclease/phosphatase family protein (TAIR:AT1G05630.2). | 2 | - | View |
AT2G43900 | Encodes a 5-inositol-phosphate phosphatase, that, in vitro, shows activity against IP(1,4,5). Endonuclease/exonuclease/phosphatase family protein; FUNCTIONS IN: inositol-polyphosphate 5-phosphatase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: sperm cell, male gametophyte, flower, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Inositol polyphosphate related phosphatase (InterPro:IPR000300), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: Endonuclease/exonuclease/phosphatase family protein (TAIR:AT1G05630.2); Has 8064 Blast hits to 7016 proteins in 490 species: Archae - 18; Bacteria - 518; Metazoa - 2458; Fungi - 805; Plants - 729; Viruses - 32; Other Eukaryotes - 3504 (source: NCBI BLink). Endonuclease/exonuclease/phosphatase family protein | 2 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL1G05190 | No description available. | scaffold_1 | + | View |
AL4G16740 | No description available. | scaffold_4 | - | View |
AL4G31530 | No description available. | scaffold_4 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR10G02060 | No description available. | A10 | - | View |
BR09G52980 | No description available. | A09 | - | View |
BR05G12230 | No description available. | A05 | + | View |
BR08G30880 | No description available. | A08 | - | View |
BR03G21810 | No description available. | A03 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV4G14590 | No description available. | Bvchr4.sca001 | + | View |
BV3G14630 | No description available. | Bvchr3.sca006 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_001G04660 | No description available. | scaffold_1 | + | View |
CRU_004G12740 | No description available. | scaffold_4 | - | View |
CRU_004G25470 | No description available. | scaffold_4 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0002G11890 | No description available. | scaffold_2 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT08G07930 | No description available. | Chr08 | - | View |
PT17G00690 | No description available. | Chr17 | - | View |
PT10G17740 | No description available. | Chr10 | + | View |
PT07G14510 | No description available. | Chr07 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL12G019070 | Type I inositol-1%2C4%2C5-trisphosphate 5-phosphatase 12 (AHRD V1 ***- IP5PC_ARATH) | ch12 | - | View |
SL12G096660 | Inositol-1 4 5-trisphosphate 5-Phosphatase-like protein (AHRD V1 *-*- Q9M1W5_ARATH)%3B contains Interpro domain(s) IPR000300 Inositol polyphosphate related phosphatase | ch12 | + | View |
SL08G014580 | Inositol-1%2C4%2C5-trisphosphate 5-phosphatase 1 (AHRD V1 *-** SYJ1_SCHPO)%3B contains Interpro domain(s) IPR000300 Inositol polyphosphate related phosphatase | ch08 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST12G028990 | Inositol-1 4 5-trisphosphate 5-Phosphatase-like protein (AHRD V1 *-** Q9M1W5_ARATH); contains Interpro domain(s) IPR000300 Inositol polyphosphate related phosphatase | chr12 | + | View |
ST11G009910 | Inositol 1 4 5-trisphosphate 5-phosphatase-like protein (AHRD V1 *-*- Q6H453_ORYSJ); contains Interpro domain(s) IPR000300 Inositol polyphosphate related phosphatase | chr11 | + | View |
ST08G010430 | Inositol 5-phosphatase 4 (AHRD V1 *-** Q8I7P3_DICDI); contains Interpro domain(s) IPR000300 Inositol polyphosphate related phosphatase | chr08 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0005G00230 | No description available. | scaffold_5 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP4G25990 | similar to AT2G43900|inositol or phosphatidylinositol phosphatase/ inositol-polyphosphate 5-phosphatase | ch4-6 | - | View |
TP1G04480 | similar to AT1G05630|5PTASE13 | ch1-1 | + | View |
TP4G14110 | similar to AT2G31830|endonuclease/exonuclease/phosphatase family protein | ch4-6 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV05G13990 | name=GSVIVG01038245001; | chr5 | - | View |