Anchorpoints

Gene id
AT1G05150
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT2G32450Calcium-binding tetratricopeptide family protein Calcium-binding tetratricopeptide family protein; FUNCTIONS IN: binding, zinc ion binding, calcium ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), EF-HAND 2 (InterPro:IPR018249), Zinc finger, ZZ-type (InterPro:IPR000433), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Calcium-binding tetratricopeptide family protein (TAIR:AT1G05150.1); Has 35687 Blast hits to 16899 proteins in 1653 species: Archae - 1571; Bacteria - 18642; Metazoa - 4222; Fungi - 630; Plants - 961; Viruses - 0; Other Eukaryotes - 9661 (source: NCBI BLink).2+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G04630No description available.scaffold_1-View
AL4G17500No description available.scaffold_4+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR10G02580No description available.A10+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_004G13370No description available.scaffold_4+View
CRU_001G04090No description available.scaffold_1-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP4G14820similar to AT2G32450|calcium-binding EF hand family proteinch4-6+View
TP1G04000similar to AT1G05150|calcium-binding EF hand family proteinch1-1-View


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Gene id
Species
Description
Chromosome
Strand