Anchorpoints

Gene id
AT1G04220
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT5G437603-ketoacyl-CoA synthase 20 (KCS20); FUNCTIONS IN: fatty acid elongase activity; INVOLVED IN: response to cold, response to light stimulus, response to osmotic stress; LOCATED IN: membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 2 (TAIR:AT1G04220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). Encodes KCS20, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). 3-ketoacyl-CoA synthase 205+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G03550No description available.scaffold_1-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR00G06970No description available.Scaffold000111+View
BR06G38540No description available.A06-View
BR10G03540No description available.A10+View
BR08G31460No description available.A08+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL05G05210No description available.Chr5+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00006G05870No description available.CM3.5_scaffold00006+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G03130No description available.scaffold_1-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0008G25830No description available.scaffold_8+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM10G00440No description available.Gm10+View
GM10G32260No description available.Gm10-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR06G06980No description available.Chr06-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD13G020060No description available.13-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME01551G01520No description available.scaffold01551+View
ME10563G00570No description available.scaffold10563-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT1G0764303-ketoacyl-CoA synthase-like proteinchr1+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G02520No description available.scaffold_1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G07930No description available.Chr10+View
PT08G16000No description available.Chr08-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29844G00320No description available.29844+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G053870Fatty acid elongase 3-ketoacyl-CoA synthase (AHRD V1 **** Q6DUV6_BRANA)%3B contains Interpro domain(s) IPR012392 Very-long-chain 3-ketoacyl-CoA synthasech06+View
SL03G005320Fatty acid elongase 3-ketoacyl-CoA synthase (AHRD V1 **** Q6DUV5_BRANA)%3B contains Interpro domain(s) IPR012392 Very-long-chain 3-ketoacyl-CoA synthasech03-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST06G0169003-ketoacyl-CoA synthase (AHRD V1 ***- B9HKC7_POPTR); contains Interpro domain(s) IPR012392 Very-long-chain 3-ketoacyl-CoA synthasechr06+View
ST03G0055403-ketoacyl-CoA synthase (AHRD V1 ***- B9RTG6_RICCO); contains Interpro domain(s) IPR012392 Very-long-chain 3-ketoacyl-CoA synthasechr03-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0004G24520No description available.scaffold_4-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP2G08570similar to AT5G43760|KCS20 (3-KETOACYL-COA SYNTHASE 20)ch2-4+View
TP1G03040similar to AT1G04220|KCS2 (3-KETOACYL-COA SYNTHASE 2)ch1-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV05G05780name=GSVIVG01018086001;chr5-View


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