Anchorpoints

Gene id
AT1G03680
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT4G03520chloroplast localized thioredoxin, similar to prokaryotic types. ATHM2; FUNCTIONS IN: enzyme activator activity; INVOLVED IN: response to oxidative stress, positive regulation of catalytic activity; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin (InterPro:IPR005746), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin M-type 1 (TAIR:AT1G03680.1); Has 20603 Blast hits to 19509 proteins in 2977 species: Archae - 276; Bacteria - 10688; Metazoa - 2669; Fungi - 1127; Plants - 1883; Viruses - 7; Other Eukaryotes - 3953 (source: NCBI BLink). Thioredoxin superfamily protein4-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G01920No description available.scaffold_3-View
AL6G37730No description available.scaffold_6+View
AL1G02950No description available.scaffold_1-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR01G37500No description available.A01+View
BR09G53890No description available.A09+View
BR03G26680No description available.A03+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL07G06410No description available.Chr7+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00034G01500No description available.supercontig_34-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_006G32340No description available.scaffold_6+View
CRU_001G02600No description available.scaffold_1-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0001G14950No description available.scaffold_1-View
EG0006G28160No description available.scaffold_6+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G21440Thioredoxin M-type, chloroplastic (Trx-M), Precursor (similar to)LG6-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM12G23331No description available.Gm12-View
GM06G37970No description available.Gm06+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR09G39050No description available.Chr09+View
GR13G16800No description available.Chr13-View
GR12G12920No description available.Chr12+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ3G005540No description available.chr3-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME11689G00520No description available.scaffold11689-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_009G00830No description available.scaffold_9+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT13G13220No description available.Chr13+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29983G00980No description available.29983+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL10G006970Thioredoxin m (AHRD V1 ***- B9HZV8_POPTR)%3B contains Interpro domain(s) IPR005746 Thioredoxinch10-View
SL10G008390Thioredoxin (AHRD V1 ***- A7LNX7_9CARY)%3B contains Interpro domain(s) IPR005746 Thioredoxinch10+View
SL07G063190Thioredoxin (AHRD V1 ***- A7LNX7_9CARY)%3B contains Interpro domain(s) IPR005746 Thioredoxinch07+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST10G009100Thioredoxin (AHRD V1 ***- A7LNX7_9CARY); contains Interpro domain(s) IPR005746 Thioredoxinchr10-View
ST07G024020Thioredoxin (AHRD V1 ***- A7LNX7_9CARY); contains Interpro domain(s) IPR005746 Thioredoxinchr07-View
ST10G007190Thioredoxin m (AHRD V1 ***- B9HZV8_POPTR); contains Interpro domain(s) IPR005746 Thioredoxinchr10-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0002G17400No description available.scaffold_2-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G03540similar to AT4G03520|ATHM2ch6-1-View
TP1G02560similar to AT1G03680|ATHM1ch1-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV12G01450name=GSVIVG01020537001;chr12+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM10G12320thioredoxin F-type10+View


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Gene id
Species
Description
Chromosome
Strand