Anchorpoints

Gene id
AL8G34470
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G17890calcium-dependent protein kinase 16 (CPK16); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 18 (TAIR:AT4G36070.1); Has 126765 Blast hits to 124478 proteins in 3942 species: Archae - 195; Bacteria - 14619; Metazoa - 47448; Fungi - 14527; Plants - 27603; Viruses - 509; Other Eukaryotes - 21864 (source: NCBI BLink). calcium-dependent protein kinase 16 Encodes a member of Calcium Dependent Protein Kinase. Protein is N-myristoylated. Localizes to the plasma membrane. Localizes to the chloroplast when the myristoylation motif is mutated.2-View
AT5G66210member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 28 (CPK28); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, ATP binding, calcium ion binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 16 (TAIR:AT2G17890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). calcium-dependent protein kinase 285-View
AT4G36070calcium-dependent protein kinase 18 member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 18 (CPK18); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: sperm cell, male gametophyte; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 16 (TAIR:AT2G17890.1).4-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G36340No description available.A03+View
BR07G12120No description available.A07+View
BR03G55090No description available.A03-View
BR09G07900No description available.A09-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV6G17430No description available.Bvchr6.sca002-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G20430No description available.Chr1+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00007G09390No description available.CM3.5_scaffold00007+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00006G02480No description available.supercontig_6+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G30820No description available.scaffold_3-View
CRU_008G27440No description available.scaffold_8+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00017G01120No description available.scaffold00017+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0009G19770No description available.scaffold_9-View
EG0010G21060No description available.scaffold_10+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV1G13650Calcium-dependent protein kinase 28 (similar to)LG1-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM11G08180No description available.Gm11+View
GM01G37100No description available.Gm01-View
GM16G23870No description available.Gm16-View
GM02G05440No description available.Gm02-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR07G19450No description available.Chr07-View
GR11G09830No description available.Chr11-View
GR03G00950No description available.Chr03-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD02G011420No description available.2-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME07520G02590No description available.scaffold07520+View
ME06512G01120No description available.scaffold06512+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G022030calcium-dependent kinasechr5+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_007G18910No description available.scaffold_7+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT05G11360No description available.Chr05-View
PT07G05760No description available.Chr07-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29830G00040No description available.29830-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G083850Calcium-dependent protein kinase (AHRD V1 **** C6KGT3_SOLLC)%3B contains Interpro domain(s) IPR002290 Serine/threonine protein kinasech02-View
SL03G033540Calcium-dependent protein kinase (AHRD V1 **** C6KGT3_SOLLC)%3B contains Interpro domain(s) IPR002290 Serine/threonine protein kinasech03-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST03G009220Calcium-dependent protein kinase (AHRD V1 **** C6KGT3_SOLLC); contains Interpro domain(s) IPR002290 Serine/threonine protein kinasechr03-View
ST02G027200Calcium-dependent protein kinase (AHRD V1 **** C6KGT3_SOLLC); contains Interpro domain(s) IPR002290 Serine/threonine protein kinasechr02-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G01740No description available.scaffold_1-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G33850similar to AT4G36070|CPK18ch7-6-View
TP2G30480similar to AT5G66210|CPK28ch2-4+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV04G00750name=GSVIVG01018778001;chr4+View


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Description
Chromosome
Strand