Anchorpoints

Gene id
AL8G33300
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL7G03490No description available.scaffold_7+View
AL5G19740No description available.scaffold_5+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G36900related to AP2 10 (RAP2.10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: DREB and EAR motif protein 3 (TAIR:AT2G23340.1); Has 5719 Blast hits to 5612 proteins in 252 species: Archae - 0; Bacteria - 2; Metazoa - 4; Fungi - 0; Plants - 5703; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family (RAP2.10). The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.9 and RAP2.1. related to AP2 104+View
AT5G67190DREB and EAR motif protein 2 encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. DREB and EAR motif protein 2 (DEAR2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: sepal, male gametophyte, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cooperatively regulated by ethylene and jasmonate 1 (TAIR:AT3G50260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).5-View
AT3G50260Encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. Involved in defense and freezing stress responses. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. cooperatively regulated by ethylene and jasmonate 1 cooperatively regulated by ethylene and jasmonate 1 (CEJ1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: DREB and EAR motif protein 2 (TAIR:AT5G67190.1); Has 5544 Blast hits to 5466 proteins in 235 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5538; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).3+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G55740No description available.A03-View
BR01G01580No description available.A01+View
BR07G11300No description available.A07+View
BR09G32170No description available.A09+View
BR09G08470No description available.A09-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV6G22620No description available.Bvchr6.sca001-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL08G15750No description available.Chr8-View
CL05G21270No description available.Chr5-View
CL01G17210No description available.Chr1-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00007G06010No description available.CM3.5_scaffold00007-View
CM00029G01550No description available.CM3.5_scaffold00029+View
CM00014G01920No description available.CM3.5_scaffold00014+View
CM00045G01310No description available.CM3.5_scaffold00045+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_005G15520No description available.scaffold_5+View
CRU_008G26480No description available.scaffold_8+View
CRU_007G02860No description available.scaffold_7+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00002G02660No description available.scaffold00002+View
CS00006G01800No description available.scaffold00006+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G18970No description available.scaffold_6+View
EG0006G01670No description available.scaffold_6+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV1G17900Ethylene-responsive transcription factor ERF010 (similar to)LG1+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM11G05700No description available.Gm11+View
GM14G09320No description available.Gm14-View
GM01G39540No description available.Gm01-View
GM17G18580No description available.Gm17+View
GM17G35860No description available.Gm17+View
GM04G04355No description available.Gm04-View
GM06G04490No description available.Gm06-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR10G02190No description available.Chr10+View
GR03G02610No description available.Chr03-View
GR08G07790No description available.Chr08-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD15G002600No description available.15+View
MD08G010800No description available.8+View
MD02G015770No description available.2-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03484G00230No description available.scaffold03484+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G016750ethylene response factorchr5+View
MT1G019110dehydration-responsive element-binding proteinchr1+View
MT3G102100ethylene response factorchr3-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G43710No description available.scaffold_1+View
PPE_006G24060No description available.scaffold_6+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G12400No description available.Chr02+View
PT07G04650No description available.Chr07-View
PT05G14090No description available.Chr05-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30170G01900No description available.30170+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G093130Ethylene-responsive transcription factor 5 (AHRD V1 *-*- EF102_ARATH)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch02+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G031600Ethylene-responsive transcription factor 9 (AHRD V1 *-*- ERF80_ARATH); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-bindingchr02+View
ST04G031580Ethylene-responsive transcription factor 5 (AHRD V1 *-*- EF102_ARATH); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-bindingchr04+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G05810No description available.scaffold_1-View
TC0008G00310No description available.scaffold_8+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G11910similar to AT3G50260|CEJ1 (COOPERATIVELY REGULATED BY ETHYLENE AND JASMONATE 1)ch5-1-View
TP7G34870similar to AT4G36900|RAP2.10 (related to AP2 10)ch7-6-View
TP2G29480similar to AT5G67190|AP2 domain-containing transcription factor, putativech2-4+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV07G05100name=GSVIVG01022076001;chr7+View


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Description
Chromosome
Strand