Anchorpoints

Gene id
AL8G33230
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL5G19580No description available.scaffold_5-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G67260CYCLIN D3;2 Encode CYCD3;2, a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs. Mediating cytokinin effects in apical growth and development. CYCLIN D3;2 (CYCD3;2); FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle, regulation of cell proliferation; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D3;3 (TAIR:AT3G50070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).5+View
AT3G50070Encode CYCD3;3, a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs. Mediating cytokinin effects in apical growth and development. CYCLIN D3;3 (CYCD3;3); FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle, regulation of cell proliferation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D3;2 (TAIR:AT5G67260.1); Has 3177 Blast hits to 3175 proteins in 306 species: Archae - 0; Bacteria - 0; Metazoa - 1493; Fungi - 379; Plants - 953; Viruses - 3; Other Eukaryotes - 349 (source: NCBI BLink). CYCLIN D3;33-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR07G11240No description available.A07-View
BR03G41450No description available.A03-View
BR01G24080No description available.A01-View
BR09G32070No description available.A09-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV1G14520No description available.Bvchr1.sca008+View
BV6G22810No description available.Bvchr6.sca001+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL05G21390No description available.Chr5+View
CL01G17330No description available.Chr1+View
CL08G15790No description available.Chr8+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00029G01610No description available.CM3.5_scaffold00029+View
CM00014G01880No description available.CM3.5_scaffold00014-View
CM00007G06100No description available.CM3.5_scaffold00007+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00021G01480No description available.supercontig_21-View
CP00055G00920No description available.supercontig_55-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_005G15360No description available.scaffold_5-View
CRU_008G26410No description available.scaffold_8-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00002G02520No description available.scaffold00002-View
CS00006G01650No description available.scaffold00006-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G18870No description available.scaffold_6-View
EG0009G06420No description available.scaffold_9-View
EG0006G01550No description available.scaffold_6-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV1G17570Cyclin-D3-3 (CycD3) (similar to)LG1-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM14G09500No description available.Gm14+View
GM04G04460No description available.Gm04+View
GM17G18360No description available.Gm17-View
GM11G05591No description available.Gm11-View
GM06G04575No description available.Gm06+View
GM01G39690No description available.Gm01+View
GM17G35671No description available.Gm17-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR11G10670No description available.Chr11+View
GR05G23560No description available.Chr05-View
GR09G21560No description available.Chr09+View
GR08G07840No description available.Chr08+View
GR13G04640No description available.Chr13+View
GR05G10110No description available.Chr05-View
GR03G02710No description available.Chr03+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD08G010530No description available.8-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME01046G00030No description available.scaffold01046-View
ME03484G00120No description available.scaffold03484-View
ME07171G00150No description available.scaffold07171-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT4G094942carboxy-terminal domain cyclinchr4+View
MT3G102310carboxy-terminal domain cyclinchr3+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G43560No description available.scaffold_1-View
PPE_006G23860No description available.scaffold_6-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT09G09780No description available.Chr09-View
PT02G12300No description available.Chr02-View
PT07G04830No description available.Chr07+View
PT05G14190No description available.Chr05+View
PT14G02300No description available.Chr14-View
PT01G30180No description available.Chr01-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30170G01690No description available.30170-View
RC29970G00090No description available.29970+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL04G078470Cyclin D3-1 (AHRD V1 ***- Q2ABE7_CAMSI)%3B contains Interpro domain(s) IPR015451 Cyclin Dch04-View
SL02G092980Cyclin D-like protein (AHRD V1 ***- Q5U8T4_TOBAC)%3B contains Interpro domain(s) IPR006671 Cyclin%2C N-terminalch02-View
SL01G107730Cyclin (AHRD V1 ***- Q1XGF1_TOBAC)%3B contains Interpro domain(s) IPR006671 Cyclin%2C N-terminalch01-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G011570Cyclin D-like protein (AHRD V1 ***- Q5U8T4_TOBAC); contains Interpro domain(s) IPR015451 Cyclin Dchr02-View
ST04G031420Cyclin D3-1 (AHRD V1 ***- Q2ABE7_CAMSI); contains Interpro domain(s) IPR015451 Cyclin Dchr04-View
ST01G044850Cyclin (AHRD V1 ***- Q1XGF1_TOBAC); contains Interpro domain(s) IPR015451 Cyclin Dchr01-View
ST12G026760Cyclin D3-1 (AHRD V1 ***- Q2ABE7_CAMSI); contains Interpro domain(s) IPR015451 Cyclin Dchr12-View
ST02G031450Cyclin D-like protein (AHRD V1 ***- Q5U8T4_TOBAC); contains Interpro domain(s) IPR015451 Cyclin Dchr02-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0002G10180No description available.scaffold_2+View
TC0001G06000No description available.scaffold_1+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP2G29410similar to AT5G67260|CYCD3ch2-4-View
TP5G12040similar to AT3G50070|CYCD3ch5-1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV07G00950name=GSVIVG01000226001;chr7-View
VV18G06660name=GSVIVG01009432001;chr18-View


Download

Gene id
Species
Description
Chromosome
Strand