Anchorpoints
- Gene id
- AL8G33160
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G67320 | high expression of osmotically responsive genes 15 (HOS15); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TBP-associated factor 5 (TAIR:AT5G25150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). Encodes a WD-40 protein involved in histone deacetylation in response to abiotic stress.Identified in a screen for mutations with altered expression of stress induced genes. Functions as a repressor of cold tolerance induced genes. Loss of function mutants are hypersensitive to freezing. WD-40 repeat family protein | 5 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR09G08530 | No description available. | A09 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV6G22960 | No description available. | Bvchr6.sca001 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL01G17450 | No description available. | Chr1 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00007G06210 | No description available. | CM3.5_scaffold00007 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00006G00750 | No description available. | supercontig_6 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_008G26340 | No description available. | scaffold_8 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00006G01500 | No description available. | scaffold00006 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0009G05960 | No description available. | scaffold_9 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV2G31040 | F-box-like/WD repeat-containing protein TBL1XR1 (probable) | LG2 | + | View |
FV1G17300 | F-box-like/WD repeat-containing protein TBL1X (similar to) | LG1 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM04G04590 | No description available. | Gm04 | + | View |
GM11G05524 | No description available. | Gm11 | - | View |
GM06G04670 | No description available. | Gm06 | + | View |
GM05G21580 | No description available. | Gm05 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR07G05580 | No description available. | Chr07 | + | View |
GR07G21930 | No description available. | Chr07 | + | View |
GR03G02760 | No description available. | Chr03 | + | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ2G032040 | No description available. | chr2 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT4G095058 | F-box-like/WD repeat TBL1XR1-like protein | chr4 | + | View |
MT5G016350 | transducin family protein/WD-40 repeat protein | chr5 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_001G43290 | No description available. | scaffold_1 | - | View |
PPE_006G23550 | No description available. | scaffold_6 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT05G14440 | No description available. | Chr05 | + | View |
PT07G05010 | No description available. | Chr07 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29970G00340 | No description available. | 29970 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL04G078320 | WD-40 repeat family protein (AHRD V1 **-- D7MKQ9_ARALY)%3B contains Interpro domain(s) IPR020472 G-protein beta WD-40 repeat%2C region | ch04 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST04G031260 | WD-40 repeat family protein (AHRD V1 **-- D7MKQ9_ARALY); contains Interpro domain(s) IPR017986 WD40 repeat, region | chr04 | - | View |
ST12G026670 | WD repeat-containing protein 5 homolog (AHRD V1 **-- WDR5_DICDI); contains Interpro domain(s) IPR017986 WD40 repeat, region | chr12 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0001G06260 | No description available. | scaffold_1 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP2G29340 | similar to AT5G67320|HOS15 (high expression of osmotically responsive genes 15) | ch2-4 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV18G06420 | name=GSVIVG01009402001; | chr18 | - | View |
VV07G00650 | name=GSVIVG01000179001; | chr7 | - | View |