Anchorpoints

Gene id
AL8G32220
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G65410Encodes ZFHD2, a member of the zinc finger homeodomain transcriptional factor family. homeobox protein 25 homeobox protein 25 (HB25); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Zinc finger, C2H2-type (InterPro:IPR007087), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 22 (TAIR:AT4G24660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).5+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00135G00420No description available.scaffold00135+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR02G41120No description available.A02+View
BR06G23280No description available.A06+View
BR09G07230No description available.A09+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV6G05430No description available.Bvchr6.sca005+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL08G11200No description available.Chr8-View
CL01G18750No description available.Chr1-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00014G04280No description available.CM3.5_scaffold00014-View
CM00007G07560No description available.CM3.5_scaffold00007-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00055G00520No description available.supercontig_55-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_008G25480No description available.scaffold_8+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00004G02700No description available.scaffold00004-View
CS00059G00450No description available.scaffold00059-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G03490No description available.scaffold_6-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM02G04550No description available.Gm02+View
GM02G37481No description available.Gm02-View
GM06G09970No description available.Gm06+View
GM14G35770No description available.Gm14-View
GM01G03060No description available.Gm01-View
GM08G38471No description available.Gm08-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR07G23380No description available.Chr07-View
GR03G04270No description available.Chr03+View
GR09G23180No description available.Chr09+View
GR10G03630No description available.Chr10+View
GR08G09200No description available.Chr08+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06916G02050No description available.scaffold06916+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT3G100650homeobox domain C ZF-HD class proteinchr3-View
MT8G069080homeobox domain C ZF-HD class proteinchr8-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS09G29130ZF-HD protein dimerisation region containing protein, expressed9-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G58800No description available.scaffold_1+View
PPE_006G20330No description available.scaffold_6+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G10290No description available.Chr02-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL04G074990Zinc finger-homeodomain protein 1 (Fragment) (AHRD V1 *--- B0LK17_YUCFI)%3B contains Interpro domain(s) IPR006456 ZF-HD homeobox protein Cys/His-rich dimerisation regionch04+View
SL05G051420Zinc finger-homeodomain protein 1 (Fragment) (AHRD V1 **-- B0LK17_YUCFI)%3B contains Interpro domain(s) IPR006456 ZF-HD homeobox protein Cys/His-rich dimerisation regionch05-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST04G029680Zinc finger-homeodomain protein 1 (Fragment) (AHRD V1 *--- B0LK17_YUCFI); contains Interpro domain(s) IPR006456 ZF-HD homeobox protein Cys/His-rich dimerisation regionchr04-View
ST05G023830Zinc finger-homeodomain protein 1 (Fragment) (AHRD V1 **-- B0LK17_YUCFI); contains Interpro domain(s) IPR006456 ZF-HD homeobox protein Cys/His-rich dimerisation regionchr05+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G08900No description available.scaffold_1-View
TC0008G06500No description available.scaffold_8-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP2G28490similar to AT5G65410|HB25 (HOMEOBOX PROTEIN 25)ch2-4+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G04260name=GSVIVG01009128001;chr18+View
VV00G06890name=GSVIVG01003614001;chrUn-View


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Gene id
Species
Description
Chromosome
Strand