Anchorpoints

Gene id
AL8G29850
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL5G17300No description available.scaffold_5+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G63260Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT3G48440.1). Zinc finger C-x8-C-x5-C-x3-H type family protein5+View
AT3G48440Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G63260.1); Has 1758 Blast hits to 1034 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 389; Fungi - 243; Plants - 962; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). Zinc finger C-x8-C-x5-C-x3-H type family protein3+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR06G17020No description available.A06-View
BR06G21380No description available.A06+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL03G03290No description available.Chr3+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00001G04280No description available.CM3.5_scaffold00001+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00004G00510No description available.supercontig_4+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_008G23350No description available.scaffold_8+View
CRU_005G13710No description available.scaffold_5+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00020G00240No description available.scaffold00020-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0002G01270No description available.scaffold_2-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM06G18253No description available.Gm06-View
GM04G36670No description available.Gm04+View
GM17G13580No description available.Gm17+View
GM05G02920No description available.Gm05+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G20440No description available.Chr08+View
GR01G06180No description available.Chr01-View
GR07G04160No description available.Chr07+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ4G026450No description available.chr4-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD06G012840No description available.6-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME10899G00190No description available.scaffold10899+View
ME12794G00180No description available.scaffold12794-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT4G104260zinc finger C-x8-C-x5-C-x3-H type family proteinchr4-View
MT3G075190zinc finger CCCH domain proteinchr3-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_005G16500No description available.scaffold_5-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT12G09250No description available.Chr12+View
PT15G08910No description available.Chr15+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30147G04870No description available.30147-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G071860Zinc finger CCCH domain-containing protein 67 (AHRD V1 *-*- C3H67_ARATH)%3B contains Interpro domain(s) IPR000571 Zinc finger%2C CCCH-typech06+View
SL03G111580Zinc finger CCCH domain-containing protein 43 (AHRD V1 ***- C3H43_ARATH)%3B contains Interpro domain(s) IPR000571 Zinc finger%2C CCCH-typech03-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST06G029190Zinc finger CCCH domain-containing protein 67 (AHRD V1 *-*- C3H67_ARATH); contains Interpro domain(s) IPR000571 Zinc finger, CCCH-typechr06-View
ST03G023490Zinc finger CCCH domain-containing protein 43 (AHRD V1 ***- C3H43_ARATH); contains Interpro domain(s) IPR000571 Zinc finger, CCCH-typechr03+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0003G12460No description available.scaffold_3+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G13590similar to AT3G48440|zinc finger (CCCH-type) family proteinch5-1-View
TP2G26380similar to AT5G63260|zinc finger (CCCH-type) family proteinch2-4+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV17G00290name=GSVIVG01007563001;chr17+View


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Gene id
Species
Description
Chromosome
Strand