Anchorpoints

Gene id
AL8G27140
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL6G07800No description available.scaffold_6+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G08070TCP domain protein 17 (TCP17); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 (TAIR:AT5G60970.1); Has 1349 Blast hits to 1349 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1349; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). TCP domain protein 17 TCP gene involved in heterochronic control of leaf differentiation.5+View
AT5G60970'TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5' (TCP5); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP domain protein 17 (TAIR:AT5G08070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). TCP gene involved in heterochronic control of leaf differentiation. TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 55-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00154G00470No description available.scaffold00154+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G40640No description available.A03-View
BR02G37940No description available.A02-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV0G76180No description available.Bvchr5_un.sca003-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL04G11520No description available.Chr4-View
CL06G16140No description available.Chr6-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00001G01270No description available.CM3.5_scaffold00001+View
CM00030G01560No description available.CM3.5_scaffold00030+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00014G01890No description available.supercontig_14+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_006G06820No description available.scaffold_6+View
CRU_008G21040No description available.scaffold_8-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00030G00970No description available.scaffold00030-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0011G21160No description available.scaffold_11+View
EG0002G05250No description available.scaffold_2+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G42330Transcription factor TCP13 (probable)LG6-View
FV5G11920Transcription factor TCP5 (similar to)LG5-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM05G00300No description available.Gm05-View
GM06G22240No description available.Gm06+View
GM04G32324No description available.Gm04-View
GM17G08761No description available.Gm17+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G19970No description available.Chr08+View
GR06G00980No description available.Chr06+View
GR01G07670No description available.Chr01-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD14G020190No description available.14+View
MD06G016760No description available.6+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME08359G01580No description available.scaffold08359-View
ME06656G01030No description available.scaffold06656-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT4G109660TCP family transcription factorchr4+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_005G20980No description available.scaffold_5+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30138G01280No description available.30138-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL03G115010Transcription factor CYCLOIDEA (Fragment) (AHRD V1 *-*- CYCLD_ANTML)%3B contains Interpro domain(s) IPR005333 Transcription factor%2C TCPch03-View
SL02G065800Transcription factor CYCLOIDEA (Fragment) (AHRD V1 *-*- CYCLD_ANTML)%3B contains Interpro domain(s) IPR005333 Transcription factor%2C TCPch02-View
SL02G089020Transcription factor (Fragment) (AHRD V1 *-*- D6MK40_9ASPA)%3B contains Interpro domain(s) IPR005333 Transcription factor%2C TCPch02+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G012660Transcription factor CYCLOIDEA (Fragment) (AHRD V1 *--- CYCLD_ANTML); contains Interpro domain(s) IPR005333 Transcription factor, TCPchr02-View
ST02G033910Transcription factor (Fragment) (AHRD V1 *-*- D6MK40_9ASPA); contains Interpro domain(s) IPR005333 Transcription factor, TCPchr02-View
ST03G028540Transcription factor CYCLOIDEA (Fragment) (AHRD V1 *-*- CYCLD_ANTMH); contains Interpro domain(s) IPR005333 Transcription factor, TCPchr03-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0003G10700No description available.scaffold_3+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP2G24280similar to AT5G60970|TCP5 (TEOSINTE BRANCHED1, CYCLOIDEA AND PCF TRANSCRIPTION FACTOR 5)ch2-4-View
TP6G34880similar to AT5G08070|TCP17 (TCP DOMAIN PROTEIN 17)ch6-6-View


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Gene id
Species
Description
Chromosome
Strand