Anchorpoints

Gene id
AL8G26590
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL1G07540No description available.scaffold_1+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G60390GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion, nucleus, plasma membrane, vacuole, cytoplasm; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT1G07940.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). GTP binding Elongation factor Tu family protein5+View
AT1G07920GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, nucleolus, plasma membrane, chloroplast, membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT5G60390.3); Has 84282 Blast hits to 84186 proteins in 18729 species: Archae - 1011; Bacteria - 33710; Metazoa - 21823; Fungi - 13003; Plants - 1919; Viruses - 6; Other Eukaryotes - 12810 (source: NCBI BLink). GTP binding Elongation factor Tu family protein1+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR08G29980No description available.A08-View
BR02G11640No description available.A02-View
BR03G09970No description available.A03-View
BR10G13000No description available.A10+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL02G21100No description available.Chr2+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00082G00770No description available.CM3.5_scaffold00082+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G06860No description available.scaffold_1+View
CRU_008G20490No description available.scaffold_8+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0002G19900No description available.scaffold_2+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR02G24960No description available.Chr02+View
GR11G24120No description available.Chr11-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD11G009930No description available.11-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_002G21030No description available.scaffold_2-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT06G13090No description available.Chr06+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST11G025970Elongation factor 1-alpha (AHRD V1 ***- Q2XTC2_SOLTU); contains Interpro domain(s) IPR004539 Translation elongation factor EF1A, eukaryotic and archaealchr11+View
ST11G026840Elongation factor 1-alpha (AHRD V1 ***- P93769_TOBAC); contains Interpro domain(s) IPR004539 Translation elongation factor EF1A, eukaryotic and archaealchr11-View
ST06G010680Elongation factor 1-alpha (AHRD V1 ***- Q2XTC2_SOLTU); contains Interpro domain(s) IPR004539 Translation elongation factor EF1A, eukaryotic and archaeal IPR000795 Protein synthesis factor, GTP-bindingchr06-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0009G25540No description available.scaffold_9-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G06600similar to AT1G07920|elongation factor 1-alpha / EF-1-alphach1-1+View
TP6G21980similar to AT5G60390|elongation factor 1-alpha / EF-1-alphach6-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV06G05030name=GSVIVG01025147001;chr6-View


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Gene id
Species
Description
Chromosome
Strand