Anchorpoints
- Gene id
- AL8G25720
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G59550 | Encodes an ABA- and drought-induced RING-DUF1117 gene whose mutation results in hyposensitive phenotypes toward ABA in terms of germination rate and stomatal closure and markedly reduced tolerance to drought stress relative to wild-type plants. zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Protein of unknown function DUF1117 (InterPro:IPR010543); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G46620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). zinc finger (C3HC4-type RING finger) family protein | 5 | - | View |
AT3G46620 | zinc finger (C3HC4-type RING finger) family protein Encodes an ABA- and drought-induced RING-DUF1117 gene whose mutation results in hyposensitive phenotypes toward ABA in terms of germination rate and stomatal closure and markedly reduced tolerance to drought stress relative to wild-type plants. zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Protein of unknown function DUF1117 (InterPro:IPR010543); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT5G59550.1); Has 8876 Blast hits to 8844 proteins in 271 species: Archae - 0; Bacteria - 6; Metazoa - 2388; Fungi - 760; Plants - 4652; Viruses - 43; Other Eukaryotes - 1027 (source: NCBI BLink). | 3 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR02G12260 | No description available. | A02 | + | View |
BR10G12240 | No description available. | A10 | - | View |
BR03G10450 | No description available. | A03 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL10G18710 | No description available. | Chr10 | - | View |
CL02G20230 | No description available. | Chr2 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00084G00620 | No description available. | CM3.5_scaffold00084 | - | View |
CM00011G02210 | No description available. | CM3.5_scaffold00011 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00081G01150 | No description available. | supercontig_81 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00014G00120 | No description available. | scaffold00014 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0010G17580 | No description available. | scaffold_10 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV3G29180 | RING finger protein 126 (probable) | LG3 | - | View |
FV7G25940 | E3 ubiquitin-protein ligase CIP8 (similar to) | LG7 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM13G41340 | No description available. | Gm13 | - | View |
GM12G06460 | No description available. | Gm12 | + | View |
GM13G19790 | No description available. | Gm13 | + | View |
GM10G05440 | No description available. | Gm10 | + | View |
GM18G40130 | No description available. | Gm18 | - | View |
GM15G04080 | No description available. | Gm15 | + | View |
GM11G14580 | No description available. | Gm11 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR01G11190 | No description available. | Chr01 | - | View |
GR13G02180 | No description available. | Chr13 | - | View |
GR11G26700 | No description available. | Chr11 | - | View |
GR03G12930 | No description available. | Chr03 | + | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ3G045300 | No description available. | chr3 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD01G010530 | No description available. | 1 | + | View |
MD11G007550 | No description available. | 11 | + | View |
MD12G012310 | No description available. | 12 | - | View |
MD03G006390 | No description available. | 3 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME06916G00420 | No description available. | scaffold06916 | + | View |
ME08265G02260 | No description available. | scaffold08265 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT4G064570 | zinc finger (C3HC4-type RING finger) family protein | chr4 | - | View |
MT2G097620 | zinc finger C C3HC4 type (RING finger) protein C putative | chr2 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_006G07080 | No description available. | scaffold_6 | + | View |
PPE_002G22930 | No description available. | scaffold_2 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT10G20130 | No description available. | Chr10 | + | View |
PT09G03480 | No description available. | Chr09 | - | View |
PT01G24330 | No description available. | Chr01 | - | View |
PT08G05810 | No description available. | Chr08 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29751G01140 | No description available. | 29751 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST04G010440 | E3 ubiquitin-protein ligase CG7694 (AHRD V1 *--- RN181_DROME); contains Interpro domain(s) IPR010543 Protein of unknown function DUF1117 | chr04 | + | View |
ST06G005080 | RING finger protein 126 (AHRD V1 *--- B6SKJ6_MAIZE) | chr06 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0005G03430 | No description available. | scaffold_5 | + | View |
TC0010G03490 | No description available. | scaffold_10r | - | View |
TC0009G31210 | No description available. | scaffold_9 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP6G21250 | similar to AT5G59550|zinc finger (C3HC4-type RING finger) family protein | ch6-6 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV06G03230 | name=GSVIVG01024920001; | chr6 | - | View |
VV08G14260 | name=GSVIVG01034134001; | chr8 | - | View |