Anchorpoints

Gene id
AL8G25720
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL5G15080No description available.scaffold_5-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G59550Encodes an ABA- and drought-induced RING-DUF1117 gene whose mutation results in hyposensitive phenotypes toward ABA in terms of germination rate and stomatal closure and markedly reduced tolerance to drought stress relative to wild-type plants. zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Protein of unknown function DUF1117 (InterPro:IPR010543); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G46620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). zinc finger (C3HC4-type RING finger) family protein5-View
AT3G46620zinc finger (C3HC4-type RING finger) family protein Encodes an ABA- and drought-induced RING-DUF1117 gene whose mutation results in hyposensitive phenotypes toward ABA in terms of germination rate and stomatal closure and markedly reduced tolerance to drought stress relative to wild-type plants. zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Protein of unknown function DUF1117 (InterPro:IPR010543); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT5G59550.1); Has 8876 Blast hits to 8844 proteins in 271 species: Archae - 0; Bacteria - 6; Metazoa - 2388; Fungi - 760; Plants - 4652; Viruses - 43; Other Eukaryotes - 1027 (source: NCBI BLink).3-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR02G12260No description available.A02+View
BR10G12240No description available.A10-View
BR03G10450No description available.A03+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL10G18710No description available.Chr10-View
CL02G20230No description available.Chr2+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00084G00620No description available.CM3.5_scaffold00084-View
CM00011G02210No description available.CM3.5_scaffold00011+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00081G01150No description available.supercontig_81+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00014G00120No description available.scaffold00014+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0010G17580No description available.scaffold_10+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV3G29180RING finger protein 126 (probable)LG3-View
FV7G25940E3 ubiquitin-protein ligase CIP8 (similar to)LG7+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM13G41340No description available.Gm13-View
GM12G06460No description available.Gm12+View
GM13G19790No description available.Gm13+View
GM10G05440No description available.Gm10+View
GM18G40130No description available.Gm18-View
GM15G04080No description available.Gm15+View
GM11G14580No description available.Gm11+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR01G11190No description available.Chr01-View
GR13G02180No description available.Chr13-View
GR11G26700No description available.Chr11-View
GR03G12930No description available.Chr03+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ3G045300No description available.chr3-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD01G010530No description available.1+View
MD11G007550No description available.11+View
MD12G012310No description available.12-View
MD03G006390No description available.3+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06916G00420No description available.scaffold06916+View
ME08265G02260No description available.scaffold08265-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT4G064570zinc finger (C3HC4-type RING finger) family proteinchr4-View
MT2G097620zinc finger C C3HC4 type (RING finger) protein C putativechr2-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G07080No description available.scaffold_6+View
PPE_002G22930No description available.scaffold_2-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G20130No description available.Chr10+View
PT09G03480No description available.Chr09-View
PT01G24330No description available.Chr01-View
PT08G05810No description available.Chr08-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29751G01140No description available.29751+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST04G010440E3 ubiquitin-protein ligase CG7694 (AHRD V1 *--- RN181_DROME); contains Interpro domain(s) IPR010543 Protein of unknown function DUF1117chr04+View
ST06G005080RING finger protein 126 (AHRD V1 *--- B6SKJ6_MAIZE)chr06-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0005G03430No description available.scaffold_5+View
TC0010G03490No description available.scaffold_10r-View
TC0009G31210No description available.scaffold_9+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G21250similar to AT5G59550|zinc finger (C3HC4-type RING finger) family proteinch6-6-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV06G03230name=GSVIVG01024920001;chr6-View
VV08G14260name=GSVIVG01034134001;chr8-View


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Gene id
Species
Description
Chromosome
Strand