Anchorpoints

Gene id
AL8G24760
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL5G15930No description available.scaffold_5-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G58787RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G47160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).5+View
AT3G47160RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G58787.1).3-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00029G04130No description available.scaffold00029-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G10810No description available.A03-View
BR06G18040No description available.A06+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV7G05100No description available.Bvchr7.sca021-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL03G00810No description available.Chr3+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00044G00870No description available.CM3.5_scaffold00044+View
CM00011G00890No description available.CM3.5_scaffold00011+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00112G00290No description available.supercontig_112+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_005G12540No description available.scaffold_5-View
CRU_008G18930No description available.scaffold_8+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00026G01020No description available.scaffold00026-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0010G16570No description available.scaffold_10+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM18G42920No description available.Gm18-View
GM18G07090No description available.Gm18+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR09G09230No description available.Chr09+View
GR12G11330No description available.Chr12-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD03G005300No description available.3+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06512G02490No description available.scaffold06512+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G00310No description available.scaffold_6+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT09G04540No description available.Chr09-View
PT06G09960No description available.Chr06-View
PT01G25080No description available.Chr01-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29681G00400No description available.29681-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL10G085130Zinc finger family protein (AHRD V1 **-- D7M6I2_ARALY)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech10-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST10G023650Zinc finger family protein (AHRD V1 **-- D7M6I2_ARALY); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr10+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0009G29750No description available.scaffold_9+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G14610similar to AT3G47160|protein binding / zinc ion bindingch5-1+View
TP6G20490similar to AT5G58787|zinc finger (C3HC4-type RING finger) family proteinch6-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV06G01860name=GSVIVG01024747001;chr6-View
VV08G12970name=GSVIVG01033965001;chr8-View


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Gene id
Species
Description
Chromosome
Strand