Anchorpoints

Gene id
AL8G21780
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G56320expansin A14 (EXPA14); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root, stamen; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A15 (TAIR:AT2G03090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) expansin A145+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR02G14120No description available.A02-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00119G00150No description available.supercontig_119+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_008G16220No description available.scaffold_8+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD11G000040No description available.11+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G03170No description available.scaffold_6-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT03G22350No description available.Chr03-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC28842G00140No description available.28842+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G034760Expansin (AHRD V1 ***- Q9ZP31_SOLLC); contains Interpro domain(s) IPR002963 Expansinchr02+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G18160similar to AT5G56320|ATEXPA14 (ARABIDOPSIS THALIANA EXPANSIN A14)ch6-6+View


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Gene id
Species
Description
Chromosome
Strand