Anchorpoints
- Gene id
- AL8G17960
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G53290 | cytokinin response factor 3 (CRF3); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 4 (TAIR:AT4G27950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). cytokinin response factor 3 encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. | 5 | - | View |
AT2G46310 | CRF5 encodes one of the six cytokinin response factors. It is transcriptionally upregulated in response to cytokinin. CRF5 belongs to the AP2/ERF superfamily of the transcriptional factors. CRF proteins rapidly relocalize to the nucleus in response to cytokinin. Analysis of loos-of-function mutants revealed that the CRFs function redundantly to regulate the development of embryos, cotyledons and leaves. cytokinin response factor 5 (CRF5); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 6 (TAIR:AT3G61630.1); Has 5622 Blast hits to 5574 proteins in 244 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5609; Viruses - 2; Other Eukaryotes - 11 (source: NCBI BLink). cytokinin response factor 5 | 2 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR03G13630 | No description available. | A03 | + | View |
BR10G07210 | No description available. | A10 | - | View |
BR02G15890 | No description available. | A02 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV5G06510 | No description available. | Bvchr5.sca002 | - | View |
BV3G02670 | No description available. | Bvchr3.sca003 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL05G09840 | No description available. | Chr5 | + | View |
CL01G00490 | No description available. | Chr1 | - | View |
CL05G01330 | No description available. | Chr5 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00006G01390 | No description available. | CM3.5_scaffold00006 | + | View |
CM00005G08520 | No description available. | CM3.5_scaffold00005 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00003G00430 | No description available. | supercontig_3 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_004G27960 | No description available. | scaffold_4 | + | View |
CRU_008G13150 | No description available. | scaffold_8 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00009G01860 | No description available. | scaffold00009 | + | View |
CS00104G00400 | No description available. | scaffold00104 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0011G02890 | No description available. | scaffold_11 | + | View |
EG0005G07090 | No description available. | scaffold_5 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV7G37010 | Ethylene-responsive transcription factor CRF3 (probable) | LG7 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM04G41740 | No description available. | Gm04 | - | View |
GM06G13040 | No description available. | Gm06 | + | View |
GM03G41640 | No description available. | Gm03 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR07G10560 | No description available. | Chr07 | + | View |
GR03G08220 | No description available. | Chr03 | - | View |
GR08G27120 | No description available. | Chr08 | - | View |
GR01G15690 | No description available. | Chr01 | - | View |
GR06G20040 | No description available. | Chr06 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD07G019540 | No description available. | 7 | + | View |
MD01G021330 | No description available. | 1 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME00341G00280 | No description available. | scaffold00341 | - | View |
ME06089G00350 | No description available. | scaffold06089 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT3G090760 | ethylene response factor | chr3 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_002G17670 | No description available. | scaffold_2 | + | View |
PPE_002G29340 | No description available. | scaffold_2 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT12G03290 | No description available. | Chr12 | - | View |
PT02G16740 | No description available. | Chr02 | + | View |
PT15G02320 | No description available. | Chr15 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30169G03130 | No description available. | 30169 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL08G081960 | Ethylene-responsive transcription factor 4 (AHRD V1 *-*- ERF4_NICSY)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-binding | ch08 | + | View |
SL06G051840 | Ethylene responsive transcription factor 1a (AHRD V1 *-*- C0J9I9_9ROSA)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-binding | ch06 | + | View |
SL03G007460 | Ethylene-responsive transcription factor 4 (AHRD V1 *-*- ERF4_TOBAC)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-binding | ch03 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST06G016220 | Ethylene responsive transcription factor 1a (AHRD V1 *-*- C0J9I9_9ROSA); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding | chr06 | - | View |
ST03G013720 | Ethylene-responsive transcription factor 2 (AHRD V1 *-*- ERF2_TOBAC); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding | chr03 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0003G28720 | No description available. | scaffold_3 | + | View |
TC0003G19260 | No description available. | scaffold_3 | + | View |
TC0001G34500 | No description available. | scaffold_1 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP6G15440 | similar to AT5G53290|CRF3 (CYTOKININ RESPONSE FACTOR 3) | ch6-6 | - | View |