Anchorpoints

Gene id
AL8G15710
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G25240SKU5 similar 1 Encodes GPI-anchored SKU5-like protein. SKU5 similar 1 (SKS1); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 2 (TAIR:AT5G51480.1); Has 5221 Blast hits to 5195 proteins in 927 species: Archae - 4; Bacteria - 1535; Metazoa - 283; Fungi - 1954; Plants - 1280; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink).4+View
AT5G51480SKU5 similar 2 (SKS2); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 1 (TAIR:AT4G25240.1); Has 5377 Blast hits to 5350 proteins in 989 species: Archae - 4; Bacteria - 1723; Metazoa - 282; Fungi - 1915; Plants - 1288; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). SKU5 similar 25+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR02G16790No description available.A02-View
BR01G27710No description available.A01-View
BR01G15210No description available.A01+View
BR03G14550No description available.A03-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV3G06060No description available.Bvchr3.sca004-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL05G08350No description available.Chr5+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00006G09240No description available.CM3.5_scaffold00006+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00003G03140No description available.supercontig_3-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_008G11310No description available.scaffold_8+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00031G00840No description available.scaffold00031-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0011G01390No description available.scaffold_11-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV7G33150Monocopper oxidase-like protein SKS1, Precursor (putative)LG7+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM04G13670No description available.Gm04-View
GM06G47670No description available.Gm06+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR01G04830No description available.Chr01-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD01G017200No description available.1+View
MD07G016790No description available.7+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06701G00560No description available.scaffold06701+View
ME01127G00550No description available.scaffold01127+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT3G008580monocopper oxidase SKS1-like proteinchr3+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_002G26640No description available.scaffold_2+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT15G12720No description available.Chr15+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30147G01660No description available.30147-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL03G083900Laccase-22 (AHRD V1 **-- LAC22_ORYSJ)%3B contains Interpro domain(s) IPR001117 Multicopper oxidase%2C type 1ch03-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0003G15870No description available.scaffold_3+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G23260similar to AT4G25240|SKS1 (SKU5 SIMILAR 1)ch7-4+View
TP6G13640similar to AT5G51480|SKS2 (SKU5 SIMILAR 2)ch6-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV16G04050name=GSVIVG01018624001;chr16+View


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Gene id
Species
Description
Chromosome
Strand