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WorkbenchAnchorpoints
- Gene id
- AL8G05720
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT5G44200 | CAP-binding protein 20 (CBP20); FUNCTIONS IN: RNA binding, RNA cap binding; INVOLVED IN: RNA metabolic process, RNA splicing, via endonucleolytic cleavage and ligation, primary microRNA processing; LOCATED IN: mRNA cap binding complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G46020.1); Has 1672 Blast hits to 1670 proteins in 70 species: Archae - 0; Bacteria - 6; Metazoa - 7; Fungi - 2; Plants - 1623; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). Encodes a nuclear cap-binding protein that forms a heterodimeric complex with ABH1 (ATCBP80) and is likely to participate in RNA metabolism. Its mRNA is ubiquitously expressed.Loss of function mutations suggest a role in processing of pri-miRNA and mRNA splicing. CAP-binding protein 20 | 5 | - | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR06G38200 | No description available. | A06 | + | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00083G00860 | No description available. | supercontig_83 | + | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_008G04230 | No description available. | scaffold_8 | + | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV6G21850 | Nuclear cap-binding protein subunit 2 (AtCBP20) (probable) | LG6 | - | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM13G37030 | No description available. | Gm13 | - | View |
| GM12G33400 | No description available. | Gm12 | + | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD09G027850 | No description available. | 9 | - | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME02307G00230 | No description available. | scaffold02307 | - | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT2G090655 | nuclear cap-binding protein subunit 2 | chr2 | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT07G13740 | No description available. | Chr07 | - | View |
| PT17G01460 | No description available. | Chr17 | + | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC29983G00380 | No description available. | 29983 | - | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0002G18000 | No description available. | scaffold_2 | + | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP2G09020 | similar to AT5G44200|CBP20 (CAP-BINDING PROTEIN 20) | ch2-4 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV12G01990 | name=GSVIVG01020600001; | chr12 | - | View |