Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AL8G02530
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT4G18610 | LIGHT SENSITIVE HYPOCOTYLS 9 (LSH9); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 (InterPro:IPR006936); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) (TAIR:AT1G07090.1); Has 307 Blast hits to 307 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 0; Plants - 293; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). Protein of unknown function (DUF640) | 4 | + | View |
| AT1G16910 | LIGHT SENSITIVE HYPOCOTYLS 8 (LSH8); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 (InterPro:IPR006936); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) (TAIR:AT1G78815.1); Has 310 Blast hits to 310 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 0; Plants - 296; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). Protein of unknown function (DUF640) | 1 | + | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR02G28220 | No description available. | A02 | - | View |
| BR08G11460 | No description available. | A08 | + | View |
| BR01G09750 | No description available. | A01 | + | View |
| BR03G44690 | No description available. | A03 | + | View |
Beta vulgaris
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BV8G10150 | No description available. | Bvchr8.sca001 | + | View |
Citrullus lanatus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CL03G07450 | No description available. | Chr3 | - | View |
| CL01G23850 | No description available. | Chr1 | + | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_002G24240 | No description available. | scaffold_2 | - | View |
| CRU_007G21580 | No description available. | scaffold_7 | - | View |
| CRU_008G02020 | No description available. | scaffold_8 | + | View |
Citrus sinensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CS00007G01080 | No description available. | scaffold00007 | + | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0004G03840 | No description available. | scaffold_4 | - | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM13G30290 | No description available. | Gm13 | - | View |
| GM15G08880 | No description available. | Gm15 | + | View |
| GM13G34550 | No description available. | Gm13 | + | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR11G03970 | No description available. | Chr11 | - | View |
| GR09G16230 | No description available. | Chr09 | - | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD05G005450 | No description available. | 5 | + | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT2G016110 | DUF640 family protein | chr2 | + | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_004G05880 | No description available. | scaffold_4 | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT11G06640 | No description available. | Chr11 | + | View |
| PT04G05730 | No description available. | Chr04 | + | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC29900G00870 | No description available. | 29900 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL02G076820 | Light-dependent short hypocotyls 1 (AHRD V1 ***- D7M6V0_ARALY)%3B contains Interpro domain(s) IPR006936 Protein of unknown function DUF640 | ch02 | + | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST07G022110 | Light-dependent short hypocotyls 1 (AHRD V1 ***- D7M6V0_ARALY); contains Interpro domain(s) IPR006936 Protein of unknown function DUF640 | chr07 | + | View |
| ST02G019400 | Light-dependent short hypocotyls 1 (AHRD V1 ***- D7M6V0_ARALY); contains Interpro domain(s) IPR006936 Protein of unknown function DUF640 | chr02 | + | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0006G16700 | No description available. | scaffold_6 | - | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP7G15410 | similar to AT4G18610|LSH9 (LIGHT SENSITIVE HYPOCOTYLS 9) | ch7-4 | - | View |
| TP2G10790 | similar to AT4G18610|LSH9 (LIGHT SENSITIVE HYPOCOTYLS 9) | ch2-4 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV10G02160 | name=GSVIVG01021215001; | chr10 | + | View |