PLAZA 3.0 Dicots : colinear gene pairs

Anchorpoints

Gene id: AL7G40400
Organism: Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id	Description	Chromosome	Strand	Multiplicon
AL2G14600	No description available.	scaffold_2	-	View

Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
AT5G38240	Protein kinase family protein Protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT5G38250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).	5	-	View
AT1G66910	Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66930.1); Has 113951 Blast hits to 112305 proteins in 4393 species: Archae - 178; Bacteria - 12361; Metazoa - 42729; Fungi - 9627; Plants - 32494; Viruses - 324; Other Eukaryotes - 16238 (source: NCBI BLink). Protein kinase superfamily protein	1	-	View

Brassica rapa

Gene id	Description	Chromosome	Strand	Multiplicon
BR02G18040	No description available.	A02	-	View
BR02G00170	No description available.	A02	-	View

Capsella rubella

Gene id	Description	Chromosome	Strand	Multiplicon
CRU_005G11850	No description available.	scaffold_5	-	View
CRU_002G12320	No description available.	scaffold_2	-	View

Eucalyptus grandis

Gene id	Description	Chromosome	Strand	Multiplicon
EG0010G13260	No description available.	scaffold_10	-	View

Manihot esculenta

Gene id	Description	Chromosome	Strand	Multiplicon
ME04043G00700	No description available.	scaffold04043	+	View
ME06871G00480	No description available.	scaffold06871	+	View

Populus trichocarpa

Gene id	Description	Chromosome	Strand	Multiplicon
PT17G11690	No description available.	Chr17	-	View

Solanum tuberosum

Gene id	Description	Chromosome	Strand	Multiplicon
ST02G029380	Receptor-like protein kinase (AHRD V1 ***- D3G6F0_CAPAN); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase	chr02	-	View

Thellungiella parvula

Gene id	Description	Chromosome	Strand	Multiplicon
TP7G03770	similar to AT5G38280\|PR5K	ch7-1	+	View
TP5G21920	similar to AT1G66930\|serine/threonine protein kinase family protein	ch5-6	-	View

Vitis vinifera

Gene id	Description	Chromosome	Strand	Multiplicon
VV14G07880	name=GSVIVG01030995001;	chr14	+	View