Anchorpoints

Gene id
AL7G39180
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G39320UDP-glucose 6-dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucose/GDP-mannose dehydrogenase, N-terminal (InterPro:IPR001732), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-binding domain (InterPro:IPR014028), UDP-glucose/GDP-mannose dehydrogenase, C-terminal (InterPro:IPR014027), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose/GDP-mannose dehydrogenase, dimerisation (InterPro:IPR014026), Nucleotide sugar dehydrogenase (InterPro:IPR017476); BEST Arabidopsis thaliana protein match is: UDP-glucose 6-dehydrogenase family protein (TAIR:AT3G29360.2); Has 13476 Blast hits to 13452 proteins in 2147 species: Archae - 313; Bacteria - 7039; Metazoa - 213; Fungi - 97; Plants - 213; Viruses - 14; Other Eukaryotes - 5587 (source: NCBI BLink). UDP-glucose 6-dehydrogenase family protein5+View
AT3G29360UDP-glucose 6-dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucose/GDP-mannose dehydrogenase, N-terminal (InterPro:IPR001732), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-binding domain (InterPro:IPR014028), UDP-glucose/GDP-mannose dehydrogenase, C-terminal (InterPro:IPR014027), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose/GDP-mannose dehydrogenase, dimerisation (InterPro:IPR014026), Nucleotide sugar dehydrogenase (InterPro:IPR017476); BEST Arabidopsis thaliana protein match is: UDP-glucose 6-dehydrogenase family protein (TAIR:AT5G39320.1); Has 13454 Blast hits to 13430 proteins in 2148 species: Archae - 313; Bacteria - 7048; Metazoa - 213; Fungi - 99; Plants - 213; Viruses - 14; Other Eukaryotes - 5554 (source: NCBI BLink). Encodes one of four UDP-glucose dehydrogenase UGD) genes. Mutation of this gene in combination with UGD3 leads to swollen plant cell walls and severe developmental defects associated with changes in pectic polysaccharides. UDP-glucose 6-dehydrogenase family protein3-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR02G00450No description available.A02-View
BR06G31690No description available.A06+View
BR04G08760No description available.A04+View
BR04G11420No description available.A04+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00014G01610No description available.supercontig_14-View
CP00001G01050No description available.supercontig_1-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_005G07490No description available.scaffold_5-View
CRU_007G35310No description available.scaffold_7-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00015G02400No description available.scaffold00015-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0010G12050No description available.scaffold_10+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM19G03500No description available.Gm19-View
GM02G12870No description available.Gm02-View
GM08G26520UDP-glucose 6-dehydrogenase 1Gm08-View
GM18G50000UDP-glucose 6-dehydrogenase 1Gm18-View
GM13G06050No description available.Gm13-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR07G08180No description available.Chr07-View
GR08G17790No description available.Chr08+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06609G00370No description available.scaffold06609+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT7G012950UDP-glucose 6-dehydrogenase family proteinchr7-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_003G23690No description available.scaffold_3+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT04G11860No description available.Chr04-View
PT17G09200No description available.Chr17-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G088690UDP-glucose 6-dehydrogenase (AHRD V1 **** B6TBY8_MAIZE)%3B contains Interpro domain(s) IPR001732 UDP-glucose/GDP-mannose dehydrogenase%2C N-terminalch02-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST03G028860UDP-glucose dehydrogenase (AHRD V1 ***- B1N754_EUCGR); contains Interpro domain(s) IPR014028 UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-bindingchr03+View
ST02G034190UDP-glucose 6-dehydrogenase (AHRD V1 ***- B6TBY8_MAIZE); contains Interpro domain(s) IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminalchr02+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0004G09670No description available.scaffold_4-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G02670similar to AT5G39320|UDP-glucose 6-dehydrogenase, putativech7-1-View
TP2G17950similar to AT3G29360|UDP-glucose 6-dehydrogenase, putativech2-4-View


Download

Gene id
Species
Description
Chromosome
Strand