Anchorpoints

Gene id
AL7G34950
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL2G13460No description available.scaffold_2-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G42380calmodulin like 37 (CML37); FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to ozone; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin-like 38 (TAIR:AT1G76650.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). calmodulin like 375-View
AT1G66400Encodes a calmodulin-like protein. Regulates nitric oxide levels and transition to flowering. calmodulin like 23 calmodulin like 23 (CML23); FUNCTIONS IN: calcium ion binding; INVOLVED IN: regulation of flower development, regulation of nitric oxide metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: EF hand calcium-binding protein family (TAIR:AT5G37770.1); Has 30871 Blast hits to 18969 proteins in 1622 species: Archae - 1; Bacteria - 165; Metazoa - 12615; Fungi - 7465; Plants - 6190; Viruses - 4; Other Eukaryotes - 4431 (source: NCBI BLink).1-View
AT5G37770EF hand calcium-binding protein family TOUCH 2 (TCH2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: in 13 processes; LOCATED IN: plasma membrane, actin cytoskeleton; EXPRESSED IN: 34 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin like 23 (TAIR:AT1G66400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). Encodes a protein with 40% similarity to calmodulin. Binds Ca(2+) and, as a consequence, undergoes conformational changes. CML24 expression occurs in all major organs, and transcript levels are increased from 2- to 15-fold in plants subjected to touch, darkness, heat, cold, hydrogen peroxide, abscisic acid (ABA), and indole-3-acetic acid. However, CML24 protein accumulation changes were not detectable. The putative CML24 regulatory region confers reporter expression at sites of predicted mechanical stress; in regions undergoing growth; in vascular tissues and various floral organs; and in stomata, trichomes, and hydathodes. CML24-underexpressing transgenics are resistant to ABA inhibition of germination and seedling growth, are defective in long-day induction of flowering, and have enhanced tolerance to CoCl(2), molybdic acid, ZnSO(4), and MgCl(2). Also regulates nitric oxide levels.5-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV2G08160No description available.Bvchr2.sca001-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL03G08360No description available.Chr3+View
CL05G12360No description available.Chr5+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00116G00320No description available.supercontig_116-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_007G31550No description available.scaffold_7-View
CRU_002G11670No description available.scaffold_2-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00042G00020No description available.scaffold00042-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G23620No description available.scaffold_6+View
EG0010G13580No description available.scaffold_10+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM18G04450No description available.Gm18+View
GM02G41300No description available.Gm02-View
GM11G33790No description available.Gm11-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD09G024670No description available.9-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06871G00070No description available.scaffold06871-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G079340EF hand calcium-binding family proteinchr5-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_003G14200No description available.scaffold_3-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT04G08920No description available.Chr04-View
PT17G12620No description available.Chr17-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G091480Calmodulin 4 (AHRD V1 ***- Q6WEH7_MOUSE)%3B contains Interpro domain(s) IPR011992 EF-Hand typech02-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G030020Polcalcin (AHRD V1 ***- A0PJ17_ARTVU); contains Interpro domain(s) IPR011992 EF-Hand typechr02-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0004G12410No description available.scaffold_4-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G21470similar to AT1G66400|calmodulin-related protein, putativech5-5-View
TP7G04260similar to AT5G37770|TCH2 (TOUCH 2)ch7-1-View


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Gene id
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Chromosome
Strand