Anchorpoints
- Gene id
- AL7G34950
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G42380 | calmodulin like 37 (CML37); FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to ozone; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin-like 38 (TAIR:AT1G76650.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). calmodulin like 37 | 5 | - | View |
AT1G66400 | Encodes a calmodulin-like protein. Regulates nitric oxide levels and transition to flowering. calmodulin like 23 calmodulin like 23 (CML23); FUNCTIONS IN: calcium ion binding; INVOLVED IN: regulation of flower development, regulation of nitric oxide metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: EF hand calcium-binding protein family (TAIR:AT5G37770.1); Has 30871 Blast hits to 18969 proteins in 1622 species: Archae - 1; Bacteria - 165; Metazoa - 12615; Fungi - 7465; Plants - 6190; Viruses - 4; Other Eukaryotes - 4431 (source: NCBI BLink). | 1 | - | View |
AT5G37770 | EF hand calcium-binding protein family TOUCH 2 (TCH2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: in 13 processes; LOCATED IN: plasma membrane, actin cytoskeleton; EXPRESSED IN: 34 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin like 23 (TAIR:AT1G66400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). Encodes a protein with 40% similarity to calmodulin. Binds Ca(2+) and, as a consequence, undergoes conformational changes. CML24 expression occurs in all major organs, and transcript levels are increased from 2- to 15-fold in plants subjected to touch, darkness, heat, cold, hydrogen peroxide, abscisic acid (ABA), and indole-3-acetic acid. However, CML24 protein accumulation changes were not detectable. The putative CML24 regulatory region confers reporter expression at sites of predicted mechanical stress; in regions undergoing growth; in vascular tissues and various floral organs; and in stomata, trichomes, and hydathodes. CML24-underexpressing transgenics are resistant to ABA inhibition of germination and seedling growth, are defective in long-day induction of flowering, and have enhanced tolerance to CoCl(2), molybdic acid, ZnSO(4), and MgCl(2). Also regulates nitric oxide levels. | 5 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV2G08160 | No description available. | Bvchr2.sca001 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL03G08360 | No description available. | Chr3 | + | View |
CL05G12360 | No description available. | Chr5 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00116G00320 | No description available. | supercontig_116 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_007G31550 | No description available. | scaffold_7 | - | View |
CRU_002G11670 | No description available. | scaffold_2 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00042G00020 | No description available. | scaffold00042 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0006G23620 | No description available. | scaffold_6 | + | View |
EG0010G13580 | No description available. | scaffold_10 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM18G04450 | No description available. | Gm18 | + | View |
GM02G41300 | No description available. | Gm02 | - | View |
GM11G33790 | No description available. | Gm11 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD09G024670 | No description available. | 9 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME06871G00070 | No description available. | scaffold06871 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT5G079340 | EF hand calcium-binding family protein | chr5 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_003G14200 | No description available. | scaffold_3 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT04G08920 | No description available. | Chr04 | - | View |
PT17G12620 | No description available. | Chr17 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL02G091480 | Calmodulin 4 (AHRD V1 ***- Q6WEH7_MOUSE)%3B contains Interpro domain(s) IPR011992 EF-Hand type | ch02 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST02G030020 | Polcalcin (AHRD V1 ***- A0PJ17_ARTVU); contains Interpro domain(s) IPR011992 EF-Hand type | chr02 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0004G12410 | No description available. | scaffold_4 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP5G21470 | similar to AT1G66400|calmodulin-related protein, putative | ch5-5 | - | View |
TP7G04260 | similar to AT5G37770|TCH2 (TOUCH 2) | ch7-1 | - | View |