Anchorpoints

Gene id
AL7G24360
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G30210'TEOSINTE BRANCHED 1, cycloidea, and PCF family 24' (TCP24); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 (TAIR:AT4G18390.2); Has 2035 Blast hits to 1535 proteins in 329 species: Archae - 0; Bacteria - 5; Metazoa - 128; Fungi - 18; Plants - 1446; Viruses - 0; Other Eukaryotes - 438 (source: NCBI BLink). TEOSINTE BRANCHED 1, cycloidea, and PCF family 24 TCP family protein involved in heterochronic regulation of leaf differentiation.1-View
AT4G18390'TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2' (TCP2); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea, and PCF family 24 (TAIR:AT1G30210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 24-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00092G00700No description available.scaffold00092+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G44530No description available.A03-View
BR09G28490No description available.A09+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G24770No description available.Chr1-View
CL03G06430No description available.Chr3+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00001G08820No description available.CM3.5_scaffold00001-View
CM00007G01390No description available.CM3.5_scaffold00007+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G27230No description available.scaffold_1-View
CRU_007G21830No description available.scaffold_7+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00010G00990No description available.scaffold00010+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV3G05620Transcription factor TCP2 (similar to)LG3-View
FV3G13560Transcription factor TCP4 (similar to)LG3-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM15G09910No description available.Gm15+View
GM08G10350No description available.Gm08-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR09G15390No description available.Chr09+View
GR11G04600No description available.Chr11-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD05G007670No description available.5-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME04251G00450No description available.scaffold04251+View
ME03859G00030No description available.scaffold03859+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_004G07930No description available.scaffold_4-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT04G06580No description available.Chr04+View
PT11G08310No description available.Chr11-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29693G00060No description available.29693+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL08G048370Transcription factor CYCLOIDEA (Fragment) (AHRD V1 *-*- CYCLD_ANTML)%3B contains Interpro domain(s) IPR005333 Transcription factor%2C TCPch08-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST07G021810Transcription factor CYCLOIDEA (Fragment) (AHRD V1 *-*- CYCLD_ANTML); contains Interpro domain(s) IPR005333 Transcription factor, TCPchr07-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0006G14510No description available.scaffold_6+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G15650similar to AT4G18390|TCP family transcription factor, putativech7-4+View
TP1G26030similar to AT1G30210|TCP24 (TEOSINTE BRANCHED1, CYCLOIDEA, AND PCF FAMILY 24)ch1-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV10G04600name=GSVIVG01021528001;chr10-View
VV19G02100name=GSVIVG01014236001;chr19+View


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Gene id
Species
Description
Chromosome
Strand