Anchorpoints

Gene id
AL7G18540
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G23650calcium-dependent protein kinase 6 (CDPK6); FUNCTIONS IN: calmodulin-dependent protein kinase activity, protein kinase activity, kinase activity; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 17 (TAIR:AT5G12180.1); Has 137650 Blast hits to 128872 proteins in 4025 species: Archae - 155; Bacteria - 13983; Metazoa - 52031; Fungi - 17582; Plants - 29890; Viruses - 500; Other Eukaryotes - 23509 (source: NCBI BLink). Encodes calcium dependent protein kinase 3 (CPK3), a member of the Arabidopsis CDPK gene family. CDPKs contain an intrinsic Ca2+-activation domain with four EF hand Ca2+-binding sites. CDPKs protein kinases have been proposed to function in multiple plant signal transduction pathways downstream of [Ca2+]cyt elevations, thus transducing various physiological responses. CPK3 is expressed in both guard cells and mesophyll cells. Functions in guard cell ion channel regulation. ABA and Ca(2+) activation of slow-type anion channels and, interestingly, ABA activation of plasma membrane Ca(2+)-permeable channels were impaired in independent alleles of single and double cpk3cpk6 mutant guard cells. Furthermore, ABA- and Ca(2+)-induced stomatal closing were partially impaired in these cpk3cpk6 mutant alleles. CPK6 is also a member of the Arabidopsis CDPK family. calcium-dependent protein kinase 64-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR01G13640No description available.A01-View
BR03G47340No description available.A03-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV5G06720No description available.Bvchr5.sca002+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00027G02760No description available.CM3.5_scaffold00027+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00122G00130No description available.supercontig_122-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_007G16590No description available.scaffold_7+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00009G01650No description available.scaffold00009-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0005G06840No description available.scaffold_5-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV5G04170Calcium-dependent protein kinase 3 (AtCDPK6) (similar to)LG5-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM11G02260No description available.Gm11+View
GM05G37260No description available.Gm05+View
GM02G34890No description available.Gm02-View
GM01G43241No description available.Gm01-View
GM08G02300No description available.Gm08-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR03G08400No description available.Chr03+View
GR07G02500No description available.Chr07-View
GR08G25100No description available.Chr08-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ4G046430No description available.chr4-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME05280G00890No description available.scaffold05280-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G009830calmodulin-domain kinase CDPK proteinchr5+View
MT8G099095calmodulin-domain kinase CDPK proteinchr8-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_005G11920No description available.scaffold_5-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G09740No description available.Chr01+View
PT03G13400No description available.Chr03-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30190G04680No description available.30190-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL08G008170Calcium dependent protein kinase 3 (AHRD V1 **** B9GKB5_POPTR)%3B contains Interpro domain(s) IPR002290 Serine/threonine protein kinasech08-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST08G009670Calcium dependent protein kinase 3 (AHRD V1 **** B9GKB5_POPTR); contains Interpro domain(s) IPR002290 Serine/threonine protein kinasechr08+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0003G28430No description available.scaffold_3-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G21580similar to AT4G23650|CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6)ch7-4-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV02G03920name=GSVIVG01019446001;chr2-View


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Description
Chromosome
Strand