Anchorpoints
- Gene id
- AL7G18200
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL4G34660 | No description available. | scaffold_4 | + | View |
AL5G32760 | No description available. | scaffold_5 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT2G46530 | auxin response factor 11 (ARF11); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to hormone stimulus, regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), Auxin response factor (InterPro:IPR010525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: auxin response factor 18 (TAIR:AT3G61830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). auxin response factor 11 | 2 | + | View |
AT4G23980 | auxin response factor 9 (ARF9); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 11 (TAIR:AT2G46530.1); Has 2797 Blast hits to 2432 proteins in 108 species: Archae - 0; Bacteria - 0; Metazoa - 49; Fungi - 2; Plants - 2739; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). auxin response factor 9 Encodes auxin response factor 9 (ARF9). | 4 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR01G13930 | No description available. | A01 | + | View |
BR03G47630 | No description available. | A03 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00005G07390 | No description available. | CM3.5_scaffold00005 | - | View |
CM00027G02160 | No description available. | CM3.5_scaffold00027 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_007G16210 | No description available. | scaffold_7 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00009G02490 | No description available. | scaffold00009 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0005G07570 | No description available. | scaffold_5 | + | View |
EG0004G14140 | No description available. | scaffold_4 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV5G35640 | Auxin response factor 9 (putative) | LG5 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR01G15390 | No description available. | Chr01 | - | View |
GR03G07800 | No description available. | Chr03 | - | View |
GR07G02690 | No description available. | Chr07 | + | View |
GR07G10950 | No description available. | Chr07 | + | View |
GR08G12620 | No description available. | Chr08 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD02G017300 | No description available. | 2 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME03175G00490 | No description available. | scaffold03175 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_005G13160 | No description available. | scaffold_5 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT03G14210 | No description available. | Chr03 | + | View |
PT01G08860 | No description available. | Chr01 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30068G00060 | No description available. | 30068 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL08G082630 | Auxin response factor 9 (AHRD V1 **** D7R605_SOLLC)%3B contains Interpro domain(s) IPR010525 Auxin response factor | ch08 | + | View |
SL08G008380 | Auxin response factor 9 (AHRD V1 **** D7R605_SOLLC)%3B contains Interpro domain(s) IPR010525 Auxin response factor | ch08 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST08G009400 | Auxin response factor 9 (AHRD V1 **** D7R605_SOLLC); contains Interpro domain(s) IPR010525 Auxin response factor | chr08 | - | View |
ST08G027630 | Auxin response factor 9 (AHRD V1 **** D7R605_SOLLC); contains Interpro domain(s) IPR010525 Auxin response factor | chr08 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0003G29650 | No description available. | scaffold_3 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP6G06600 | similar to AT1G34410|ARF21 (AUXIN RESPONSE FACTOR 21) | ch6-1 | + | View |
TP7G21940 | similar to AT4G23980|ARF9 (AUXIN RESPONSE FACTOR 9) | ch7-4 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV02G04870 | name=GSVIVG01019566001; | chr2 | + | View |