Anchorpoints
- Gene id
- AL7G16890
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT4G25230 | RPM1 interacting protein 2 (RIN2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: RPM1 interacting protein 3 (TAIR:AT5G51450.1); Has 2005 Blast hits to 1973 proteins in 236 species: Archae - 0; Bacteria - 2; Metazoa - 699; Fungi - 246; Plants - 674; Viruses - 9; Other Eukaryotes - 375 (source: NCBI BLink). RPM1 interacting protein 2 RPM1 interacting protein 2, has a CUE domain which is sufficient for the interaction with RPM1.Positive regulator of RPM1 and PRS2 mediated hypersensitive response.Functions as ubiquitin ligase and binds to RPM1. | 4 | + | View |
AT5G51450 | Encodes RING-finger type ubiquitin ligases. RPM1 interacting protein 3 RPM1 interacting protein 3 (RIN3); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: RPM1 interacting protein 2 (TAIR:AT4G25230.2). | 5 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR08G17760 | No description available. | A08 | - | View |
BR03G48370 | No description available. | A03 | + | View |
BR01G15200 | No description available. | A01 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV0G79860 | No description available. | Bvchr3_un.sca004 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00003G03210 | No description available. | supercontig_3 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_007G14930 | No description available. | scaffold_7 | - | View |
CRU_008G11270 | No description available. | scaffold_8 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00031G00970 | No description available. | scaffold00031 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0011G01400 | No description available. | scaffold_11 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV7G32840 | Autocrine motility factor receptor (AMF receptor) (probable) | LG7 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR08G21650 | No description available. | Chr08 | + | View |
GR01G04850 | No description available. | Chr01 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD07G016720 | No description available. | 7 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME01127G00510 | No description available. | scaffold01127 | + | View |
ME06701G00510 | No description available. | scaffold06701 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_002G26590 | No description available. | scaffold_2 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT01G12400 | No description available. | Chr01 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30147G01720 | No description available. | 30147 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL06G034330 | E3 ubiquitin ligase (AHRD V1 *--* Q2URX1_ASPOR)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type | ch06 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST06G009420 | E3 ubiquitin ligase (AHRD V1 *--* Q2URX1_ASPOR); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type | chr06 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0003G15800 | No description available. | scaffold_3 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP6G13610 | similar to AT5G51450|RIN3 (RPM1 INTERACTING PROTEIN 3) | ch6-6 | + | View |
TP7G23250 | similar to AT4G25230|RIN2 (RPM1 INTERACTING PROTEIN 2) | ch7-4 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV16G04120 | name=GSVIVG01018636001; | chr16 | - | View |