PLAZA 3.0 Dicots : colinear gene pairs

Anchorpoints

Gene id: AL7G14210
Organism: Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
AT4G27670	heat shock protein 21 (HSP21); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT5G51440.1); Has 6158 Blast hits to 6158 proteins in 1414 species: Archae - 225; Bacteria - 3528; Metazoa - 23; Fungi - 170; Plants - 1466; Viruses - 0; Other Eukaryotes - 746 (source: NCBI BLink). Encodes Hsp21, a chloroplast located small heat shock protein. A structure model of Hsp21, obtained by homology modeling, single-particle electron microscopy, and lysine-specific chemical crosslinking, shows that the Hsp21 subunits are arranged in two hexameric discs, rotated by 25 degree in relation to each other. heat shock protein 21	4	-	View

Brassica rapa

Gene id	Description	Chromosome	Strand	Multiplicon
BR01G18010	No description available.	A01	-	View

Capsella rubella

Gene id	Description	Chromosome	Strand	Multiplicon
CRU_007G12390	No description available.	scaffold_7	+	View

Eucalyptus grandis

Gene id	Description	Chromosome	Strand	Multiplicon
EG0011G03750	No description available.	scaffold_11	+	View

Gossypium raimondii

Gene id	Description	Chromosome	Strand	Multiplicon
GR08G26550	No description available.	Chr08	-	View

Malus domestica

Gene id	Description	Chromosome	Strand	Multiplicon
MD01G022480	No description available.	1	+	View

Thellungiella parvula

Gene id	Description	Chromosome	Strand	Multiplicon
TP7G25650	similar to AT4G27670\|HSP21 (HEAT SHOCK PROTEIN 21)	ch7-4	-	View