Anchorpoints

Gene id
AL7G13700
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL2G24420No description available.scaffold_2+View
AL3G41890No description available.scaffold_3+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G27950cytokinin response factor 4 (CRF4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 3 (TAIR:AT5G53290.1); Has 6110 Blast hits to 5757 proteins in 250 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 6087; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). cytokinin response factor 4 encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.4-View
AT1G75490Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought. Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G18450.1); Has 5736 Blast hits to 5602 proteins in 247 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 5714; Viruses - 6; Other Eukaryotes - 14 (source: NCBI BLink).1+View
AT2G20880Integrase-type DNA-binding superfamily protein Encodes ERF53, a drought-induced transcription factor. Belongs to the AP2/ERF superfamily, and has a highly conserved AP2 domain. Regulates drought-responsive gene expressions by binding to the GCC box and/or dehydration-responsive element (DRE) in the promoter of downstream genes. Overexpression of AtERF53 driven by the CaMV35S promoter resulted in an unstable drought-tolerant phenotype in T2 transgenic plants. Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT4G28140.1); Has 5938 Blast hits to 5739 proteins in 258 species: Archae - 0; Bacteria - 4; Metazoa - 6; Fungi - 2; Plants - 5899; Viruses - 2; Other Eukaryotes - 25 (source: NCBI BLink).2+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR10G01730No description available.A10-View
BR03G50140No description available.A03-View
BR08G16880No description available.A08+View
BR09G45010No description available.A09-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV1G08400No description available.Bvchr1.sca001-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL02G00970No description available.Chr2+View
CL05G19740No description available.Chr5-View
CL02G17700No description available.Chr2+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00034G03710No description available.CM3.5_scaffold00034-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00034G01290No description available.supercontig_34+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_002G21080No description available.scaffold_2+View
CRU_007G11890No description available.scaffold_7+View
CRU_003G34180No description available.scaffold_3+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00002G04890No description available.scaffold00002+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G13020No description available.scaffold_6+View
EG0011G08080No description available.scaffold_11+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM06G45010No description available.Gm06-View
GM06G03110No description available.Gm06-View
GM04G03070No description available.Gm04-View
GM13G37451No description available.Gm13-View
GM12G33020No description available.Gm12+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR09G19780No description available.Chr09-View
GR12G13060No description available.Chr12-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD12G015290No description available.12-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT1G023170AP2 domain class transcription factorchr1+View
MT2G090235ethylene response factorchr2+View
MT3G112440dehydration-responsive element-binding proteinchr3+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G38030No description available.scaffold_1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G02940No description available.Chr02-View
PT05G23330No description available.Chr05+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30170G04700No description available.30170+View
RC29983G01230No description available.29983-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL04G080910Ethylene-responsive transcription factor 13 (AHRD V1 *-*- ERF99_ARATH)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch04+View
SL07G054220Ethylene responsive transcription factor 2a (AHRD V1 *-*- C0J9I7_9ROSA)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch07-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST04G034300Ethylene-responsive transcription factor 13 (AHRD V1 *-*- ERF99_ARATH); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-bindingchr04+View
ST07G019800Ethylene responsive transcription factor 2b (AHRD V1 *-*- C0J9I6_9ROSA); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-bindingchr07-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0008G03410No description available.scaffold_8+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G34150similar to AT2G20880|AP2 domain-containing transcription factor, putativech3-6+View
TP5G30620similar to AT1G75490|DNA binding / transcription factorch5-7+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G09710name=GSVIVG01009801001;chr18+View


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Gene id
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Description
Chromosome
Strand