Anchorpoints

Gene id
AL7G06270
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G34640squalene synthase 1 squalene synthase 1 (SQS1); FUNCTIONS IN: farnesyl-diphosphate farnesyltransferase activity; INVOLVED IN: sterol biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Squalene/phytoene synthase, conserved site (InterPro:IPR019845), Terpenoid synthase (InterPro:IPR008949), Farnesyl-diphosphate farnesyltransferase (InterPro:IPR006449), Squalene/phytoene synthase (InterPro:IPR002060); BEST Arabidopsis thaliana protein match is: squalene synthase 2 (TAIR:AT4G34650.1); Has 1469 Blast hits to 1468 proteins in 521 species: Archae - 28; Bacteria - 581; Metazoa - 114; Fungi - 174; Plants - 415; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). Encodes squalene synthase, which converts two molecules of farnesyl diphosphate (FPP) into squalene via an intermediate: presqualene diphosphate (PSPP). It is generally thought to be one of the key enzymes of sterol biosynthesis, since it catalyzes the first pathway-specific reaction of the sterol branch of the isoprenoid pathway.4+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G54320No description available.A03+View
BR08G13840No description available.A08-View
BR01G03530No description available.A01-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL11G14940No description available.Chr11+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00150G00330No description available.supercontig_150-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_007G05310No description available.scaffold_7-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0007G12600No description available.scaffold_7+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM12G04220No description available.Gm12-View
GM11G11960No description available.Gm11-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR05G24770No description available.Chr05+View
GR02G00440No description available.Chr02-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME02994G00260No description available.scaffold02994-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_008G10480No description available.scaffold_8-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT09G12310No description available.Chr09+View
PT04G16120No description available.Chr04+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G110290Squalene synthase (AHRD V1 ***- D0VFU8_SOLLC)%3B contains Interpro domain(s) IPR006449 Farnesyl-diphosphate farnesyltransferasech01+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST01G047720Squalene synthase (AHRD V1 ***- Q9XJ31_SOLTU); contains Interpro domain(s) IPR006449 Farnesyl-diphosphate farnesyltransferasechr01+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0002G07330No description available.scaffold_2-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G32430similar to AT4G34640|SQS1 (SQUALENE SYNTHASE 1)ch7-5+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV03G06090name=GSVIVG01024197001;chr3+View


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Gene id
Species
Description
Chromosome
Strand