Anchorpoints

Gene id
AL7G00890
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL2G24580No description available.scaffold_2-View
AL1G20980No description available.scaffold_1-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G38990glycosyl hydrolase 9B16 (GH9B16); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B17 (TAIR:AT4G39000.1); Has 1522 Blast hits to 1511 proteins in 198 species: Archae - 2; Bacteria - 400; Metazoa - 176; Fungi - 17; Plants - 897; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). glycosyl hydrolase 9B164-View
AT1G75680glycosyl hydrolase 9B7 (GH9B7); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B5 (TAIR:AT1G19940.1); Has 1881 Blast hits to 1863 proteins in 273 species: Archae - 2; Bacteria - 718; Metazoa - 187; Fungi - 17; Plants - 915; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). glycosyl hydrolase 9B71-View
AT1G19940glycosyl hydrolase 9B5 (GH9B5); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B7 (TAIR:AT1G75680.1); Has 1847 Blast hits to 1835 proteins in 264 species: Archae - 2; Bacteria - 685; Metazoa - 182; Fungi - 17; Plants - 919; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). glycosyl hydrolase 9B51-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR01G00200No description available.A01-View
BR06G39520No description available.A06+View
BR06G14400No description available.A06-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV9G12550No description available.Bvchr9.sca026-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL11G15000No description available.Chr11+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00059G01750No description available.CM3.5_scaffold00059+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00150G00220No description available.supercontig_150-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_002G21240No description available.scaffold_2-View
CRU_003G29100No description available.scaffold_3-View
CRU_007G00770No description available.scaffold_7-View
CRU_001G18650No description available.scaffold_1-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G13320No description available.scaffold_6-View
EG0009G10630No description available.scaffold_9+View
EG0007G12660No description available.scaffold_7-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV2G17180Endoglucanase 24, Precursor (similar to)LG2+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM04G01030No description available.Gm04-View
GM11G11910No description available.Gm11-View
GM06G01060No description available.Gm06-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR13G03260No description available.Chr13-View
GR08G03180No description available.Chr08+View
GR09G19540No description available.Chr09+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ1G042980No description available.chr1+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT3G117500glycosyl hydrolase family 9 proteinchr3+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_008G10290No description available.scaffold_8-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT04G16190No description available.Chr04+View
PT09G12390No description available.Chr09+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30131G02720No description available.30131+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G110340Endoglucanase 1 (AHRD V1 ***- B6U0P7_MAIZE)%3B contains Interpro domain(s) IPR001701 Glycoside hydrolase%2C family 9ch01+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST01G047780Endoglucanase 1 (AHRD V1 ***- B6U0P7_MAIZE); contains Interpro domain(s) IPR001701 Glycoside hydrolase, family 9chr01+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0002G07220No description available.scaffold_2-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G30780similar to AT1G75680|AtGH9B7 (Arabidopsis thaliana glycosyl hydrolase 9B7)ch5-7-View
TP7G36830similar to AT4G39010|AtGH9B18 (Arabidopsis thaliana glycosyl hydrolase 9B18)ch7-6+View
TP1G17720similar to AT1G19940|AtGH9B5 (Arabidopsis thaliana Glycosyl Hydrolase 9B5)ch1-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV03G05940name=GSVIVG01024179001;chr3+View


Download

Gene id
Species
Description
Chromosome
Strand