Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AL6G41370
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT4G00305 | RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: brassinosteroid-responsive RING-H2 (TAIR:AT3G61460.1); Has 6452 Blast hits to 6437 proteins in 243 species: Archae - 0; Bacteria - 0; Metazoa - 1579; Fungi - 466; Plants - 3776; Viruses - 3; Other Eukaryotes - 628 (source: NCBI BLink). RING/U-box superfamily protein | 4 | + | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR09G40720 | No description available. | A09 | - | View |
| BR02G26370 | No description available. | A02 | + | View |
Beta vulgaris
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BV1G06230 | No description available. | Bvchr1.sca001 | + | View |
Citrullus lanatus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CL05G01670 | No description available. | Chr5 | + | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM00006G01760 | No description available. | CM3.5_scaffold00006 | + | View |
| CM00047G00540 | No description available. | CM3.5_scaffold00047 | + | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00011G00400 | No description available. | supercontig_11 | - | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_006G35680 | No description available. | scaffold_6 | - | View |
Citrus sinensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CS00009G01240 | No description available. | scaffold00009 | - | View |
| CS00001G03400 | No description available. | scaffold00001 | - | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0005G05590 | No description available. | scaffold_5 | - | View |
| EG0004G19070 | No description available. | scaffold_4 | - | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV7G07460 | RING-H2 zinc finger protein RHA1a (probable) | LG7 | + | View |
| FV5G03280 | RING-H2 zinc finger protein RHA1b (probable) | LG5 | - | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM05G37580 | No description available. | Gm05 | + | View |
| GM18G47020 | No description available. | Gm18 | - | View |
| GM16G03810 | No description available. | Gm16 | + | View |
| GM08G02000 | No description available. | Gm08 | - | View |
| GM07G07400 | No description available. | Gm07 | + | View |
| GM09G39280 | No description available. | Gm09 | + | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR07G10170 | No description available. | Chr07 | - | View |
| GR08G12060 | No description available. | Chr08 | + | View |
| GR04G04190 | No description available. | Chr04 | + | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME02658G01040 | No description available. | scaffold02658 | + | View |
| ME03581G01530 | No description available. | scaffold03581 | + | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT8G028815 | RING-H2 zinc finger RHA1a-like protein C putative | chr8 | + | View |
| MT8G098770 | RING-H2 zinc finger protein | chr8 | - | View |
| MT7G078150 | anaphase-promoting complex subunit 11 RING-H2 finger protein | chr7 | - | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_002G16950 | No description available. | scaffold_2 | - | View |
| PPE_005G11290 | No description available. | scaffold_5 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT14G08770 | No description available. | Chr14 | - | View |
| PT02G16190 | No description available. | Chr02 | - | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC30174G03170 | No description available. | 30174 | - | View |
| RC30190G04200 | No description available. | 30190 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL08G081370 | RING-H2 finger protein (AHRD V1 *-*- Q30D22_PONTR)%3B contains Interpro domain(s) IPR011016 Zinc finger%2C RING-CH-type | ch08 | - | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST08G029050 | RING-H2 finger protein (AHRD V1 *-*- Q30D22_PONTR); contains Interpro domain(s) IPR011016 Zinc finger, RING-CH-type | chr08 | + | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0001G35280 | No description available. | scaffold_1 | + | View |
| TC0003G27890 | No description available. | scaffold_3 | - | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP6G00370 | similar to AT4G00305|zinc finger (C3HC4-type RING finger) family protein | ch6-1 | + | View |