Anchorpoints

Gene id
AL6G36190
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL7G20160No description available.scaffold_7+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G04260Bromo-adjacent homology (BAH) domain-containing protein Bromo-adjacent homology (BAH) domain-containing protein; FUNCTIONS IN: DNA binding, zinc ion binding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G22140.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).4+View
AT4G22140PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein EARLY BOLTING IN SHORT DAYS (EBS); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: positive regulation of flower development, regulation of transcription, DNA-dependent, seed germination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G04260.1); Has 1958 Blast hits to 1898 proteins in 183 species: Archae - 0; Bacteria - 0; Metazoa - 1059; Fungi - 271; Plants - 475; Viruses - 0; Other Eukaryotes - 153 (source: NCBI BLink).4-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR01G12370No description available.A01-View
BR03G46230No description available.A03-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV8G12550No description available.Bvchr8.sca004+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00152G00530No description available.supercontig_152-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_007G18260No description available.scaffold_7+View
CRU_006G30920No description available.scaffold_6+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00007G03250No description available.scaffold00007-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0004G10960No description available.scaffold_4-View
EG0011G06480No description available.scaffold_11+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV3G01630Nucleosome-remodeling factor subunit NURF301 (NURF-215) (probable)LG3-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR10G18360No description available.Chr10-View
GR09G18130No description available.Chr09-View
GR06G08250No description available.Chr06+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD05G001170No description available.5+View
MD10G026910No description available.10-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME05214G00280No description available.scaffold05214-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_004G01420No description available.scaffold_4+View
PPE_003G19240No description available.scaffold_3+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G22600No description available.Chr02+View
PT04G00490No description available.Chr04+View
PT14G15710No description available.Chr14-View
PT11G01080No description available.Chr11-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29842G00310No description available.29842+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL07G049210BAH-PHD domain-containing protein (Fragment) (AHRD V1 **-- A9S8N5_PHYPA)%3B contains Interpro domain(s) IPR001025 Bromo adjacent regionch07-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST07G018380BAH-PHD domain-containing protein (AHRD V1 **-- A9TSM0_PHYPA); contains Interpro domain(s) IPR001025 Bromo adjacent regionchr07-View
ST02G024240BAH-PHD domain-containing protein (AHRD V1 **-- A9TSM0_PHYPA); contains Interpro domain(s) IPR001025 Bromo adjacent regionchr02+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0006G22040No description available.scaffold_6-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G04540similar to AT4G22140|DNA binding / protein binding / zinc ion bindingch6-1-View
TP7G20290similar to AT4G22140|DNA binding / protein binding / zinc ion bindingch7-4-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV12G11260name=GSVIVG01030487001;chr12-View


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Gene id
Species
Description
Chromosome
Strand