Anchorpoints
- Gene id
- AL6G36190
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT4G04260 | Bromo-adjacent homology (BAH) domain-containing protein Bromo-adjacent homology (BAH) domain-containing protein; FUNCTIONS IN: DNA binding, zinc ion binding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G22140.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | 4 | + | View |
AT4G22140 | PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein EARLY BOLTING IN SHORT DAYS (EBS); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: positive regulation of flower development, regulation of transcription, DNA-dependent, seed germination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G04260.1); Has 1958 Blast hits to 1898 proteins in 183 species: Archae - 0; Bacteria - 0; Metazoa - 1059; Fungi - 271; Plants - 475; Viruses - 0; Other Eukaryotes - 153 (source: NCBI BLink). | 4 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR01G12370 | No description available. | A01 | - | View |
BR03G46230 | No description available. | A03 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV8G12550 | No description available. | Bvchr8.sca004 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00152G00530 | No description available. | supercontig_152 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_007G18260 | No description available. | scaffold_7 | + | View |
CRU_006G30920 | No description available. | scaffold_6 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00007G03250 | No description available. | scaffold00007 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0004G10960 | No description available. | scaffold_4 | - | View |
EG0011G06480 | No description available. | scaffold_11 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV3G01630 | Nucleosome-remodeling factor subunit NURF301 (NURF-215) (probable) | LG3 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR10G18360 | No description available. | Chr10 | - | View |
GR09G18130 | No description available. | Chr09 | - | View |
GR06G08250 | No description available. | Chr06 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD05G001170 | No description available. | 5 | + | View |
MD10G026910 | No description available. | 10 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME05214G00280 | No description available. | scaffold05214 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_004G01420 | No description available. | scaffold_4 | + | View |
PPE_003G19240 | No description available. | scaffold_3 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT02G22600 | No description available. | Chr02 | + | View |
PT04G00490 | No description available. | Chr04 | + | View |
PT14G15710 | No description available. | Chr14 | - | View |
PT11G01080 | No description available. | Chr11 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29842G00310 | No description available. | 29842 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL07G049210 | BAH-PHD domain-containing protein (Fragment) (AHRD V1 **-- A9S8N5_PHYPA)%3B contains Interpro domain(s) IPR001025 Bromo adjacent region | ch07 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST07G018380 | BAH-PHD domain-containing protein (AHRD V1 **-- A9TSM0_PHYPA); contains Interpro domain(s) IPR001025 Bromo adjacent region | chr07 | - | View |
ST02G024240 | BAH-PHD domain-containing protein (AHRD V1 **-- A9TSM0_PHYPA); contains Interpro domain(s) IPR001025 Bromo adjacent region | chr02 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0006G22040 | No description available. | scaffold_6 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP6G04540 | similar to AT4G22140|DNA binding / protein binding / zinc ion binding | ch6-1 | - | View |
TP7G20290 | similar to AT4G22140|DNA binding / protein binding / zinc ion binding | ch7-4 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV12G11260 | name=GSVIVG01030487001; | chr12 | - | View |